PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G191300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | bHLH | ||||||||
Protein Properties | Length: 123aa MW: 13938.2 Da PI: 9.2801 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.6 | 1.6e-06 | 79 | 103 | 27 | 55 |
SCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 27 lPkaskapskKlsKaeiLekAveYIksLq 55 +P+ +k + a++L +AveYIk+Lq Aqcoe7G191300.1.p 79 VPN----MDKQTNTADMLDLAVEYIKELQ 103 344....4678*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.13E-8 | 68 | 109 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.48E-5 | 77 | 107 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 3.1E-8 | 78 | 107 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence Send to blast |
MPCFNLTFQS NEQNPEAGNQ TRNLTHHFSL PKTSVEMAAI LEFQDSVPCK IRAKRGCATH 60 PRSIAERVTT IYILMLALVP NMDKQTNTAD MLDLAVEYIK ELQKQVKYST VWRGRTLLRI 120 TV* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_026414452.1 | 9e-44 | transcription factor bHLH130-like | ||||
Swissprot | Q66GR3 | 6e-36 | BH130_ARATH; Transcription factor bHLH130 | ||||
TrEMBL | A0A2G5ECZ3 | 1e-50 | A0A2G5ECZ3_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_009_00280.1 | 2e-51 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 2e-38 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G191300.1.p |
Publications ? help Back to Top | |||
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