PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G188500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 399aa    MW: 43944.4 Da    PI: 8.2468
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G188500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-182878256
                AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                       ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  Aqcoe7G188500.1.p 28 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 78
                       589******.7*********....4456*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.0E-352891IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-292886IPR001471AP2/ERF domain
PfamPF008472.8E-122877IPR001471AP2/ERF domain
CDDcd000185.78E-182887No hitNo description
PROSITE profilePS5103220.3762885IPR001471AP2/ERF domain
PRINTSPR003671.4E-72940IPR001471AP2/ERF domain
SuperFamilySSF541715.04E-202986IPR016177DNA-binding domain
PRINTSPR003671.4E-75167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MVGISNPIEP SVQQLSKRKV SSRRGHRRFV GVRQRPSGRW VAEIKDSLQK VRLWLGTFDT  60
AEDAARAYDD AARALRGANA RTNFDDHLQA SGSNRFGSNT NSIPENLTPF SFEEKDGCEA  120
DGLLGALKAK LLDSHGKAKI PVKIFGMNTS MSSITSRAAS IDRPTTPSIS SGITSHVLME  180
QEVCRRSTAA SPRIIQPSTN KTGTYSTQPS TAGSMNMAKV AMYQTTITAP AAALEGNHQV  240
YHSEGNDDHD NGYMSDEFQL QPQLQRQIHD QVPSSTLQFN IQTGQLHNQS AYHSLLQGQN  300
PTLNQIEANE INQYSPYVRH YHQVNLTQSP YPSYNNINNS SYINNSSIMI RQDGSEGGIW  360
SHQDHYSSLH AENNGQSTTP YNTSGRERSL IYATNLIG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1426841271Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5FAU30.0A0A2G5FAU3_AQUCA; Uncharacterized protein
STRINGAquca_001_00564.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-17related to AP2 11