PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe7G180500.6.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 591aa MW: 66887.4 Da PI: 9.2549

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G180500.6.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.4	6.2e-20	34	118	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YAk vGFsvrk++s+ + +g++ +r ++Csk+g ++++ + r+ +rtgC+a++ ++++ +k+ ++++++ HnHel+p Aqcoe7G180500.6.p 34 NFYNQYAKAVGFSVRKDSSTV-RADGTVLRRVLCCSKQGLYKDRRLL----TNVRVRSRTGCEARIIIRRH-GEKFLLIEFNEFHNHELVP 118 6*************98776.59999**********999888....899999********99.99*************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.6E-17	34	118	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence Send to blast
MDAKVKECSP EIDSTVQLLP KVGMLFQSED CAYNFYNQYA KAVGFSVRKD SSTVRADGTV 60 LRRVLCCSKQ GLYKDRRLLT NVRVRSRTGC EARIIIRRHG EKFLLIEFNE FHNHELVPPS 120 EVHRLRSQRK IEDSQARIMR NMYHEGIGPA DIYSSMCKRV GGPQNLSFTK LDCVKFLQKI 180 RHDDTVKNVV HSGNSMVVGC HPSLEKCDDC GTSMIVDCKP FLRKGDGLGT STVSECYPSS 240 TFQCNDLAHM ALTIVAKGNT SEKSAVFARK LLTQALEELD SFIKYDSDKM DHLVDIRNMN 300 HDKRDESKKS VTEVGASIRL RNPPHNKSYA RVSAEKKAAL GKGKGKKRFP KTPKGSYDQE 360 SIGAIGTTLL MLQDSSVLPK HHHNQWHDDN GACPRHSNVD ALVSDALSRT IICLHDRRKL 420 QFYFHTCIYN HAVRPLLHLH TASNLIIFPG KHGTAPLNNI YELRPLILCF TTISSLLQSE 480 SEINTKENCI ELLSLEPILR NSTQIYLSGH FLEVRTMSNL LGLINYCVLR PLYLLPTKRA 540 MIITCSSLSI SFYIKVSNRF FYFVSCLLYL ILCFLRSGVY KCNCLIYAKR *

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence Send to blast

MDAKVKECSP EIDSTVQLLP KVGMLFQSED CAYNFYNQYA KAVGFSVRKD SSTVRADGTV  60
LRRVLCCSKQ GLYKDRRLLT NVRVRSRTGC EARIIIRRHG EKFLLIEFNE FHNHELVPPS  120
EVHRLRSQRK IEDSQARIMR NMYHEGIGPA DIYSSMCKRV GGPQNLSFTK LDCVKFLQKI  180
RHDDTVKNVV HSGNSMVVGC HPSLEKCDDC GTSMIVDCKP FLRKGDGLGT STVSECYPSS  240
TFQCNDLAHM ALTIVAKGNT SEKSAVFARK LLTQALEELD SFIKYDSDKM DHLVDIRNMN  300
HDKRDESKKS VTEVGASIRL RNPPHNKSYA RVSAEKKAAL GKGKGKKRFP KTPKGSYDQE  360
SIGAIGTTLL MLQDSSVLPK HHHNQWHDDN GACPRHSNVD ALVSDALSRT IICLHDRRKL  420
QFYFHTCIYN HAVRPLLHLH TASNLIIFPG KHGTAPLNNI YELRPLILCF TTISSLLQSE  480
SEINTKENCI ELLSLEPILR NSTQIYLSGH FLEVRTMSNL LGLINYCVLR PLYLLPTKRA  540
MIITCSSLSI SFYIKVSNRF FYFVSCLLYL ILCFLRSGVY KCNCLIYAKR *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5FAL6	0.0	A0A2G5FAL6_AQUCA; Uncharacterized protein
TrEMBL	A0A2G5FAM9	0.0	A0A2G5FAM9_AQUCA; Uncharacterized protein
TrEMBL	A0A2G5FAN0	0.0	A0A2G5FAN0_AQUCA; Uncharacterized protein
STRING	Aquca_001_00496.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-25	FAR1-related sequence 5

Link Out ? help Back to Top
Phytozome	Aqcoe7G180500.6.p