PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G180500.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family FAR1
Protein Properties Length: 420aa    MW: 47321.1 Da    PI: 9.1253
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G180500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR164.23.7e-2055139191
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                        +fYn+YAk vGFsvrk++s+  + +g++ +r ++Csk+g  ++++       + r+ +rtgC+a++ ++++  +k+ ++++++ HnHel+p
  Aqcoe7G180500.3.p  55 NFYNQYAKAVGFSVRKDSSTV-RADGTVLRRVLCCSKQGLYKDRRLL----TNVRVRSRTGCEARIIIRRH-GEKFLLIEFNEFHNHELVP 139
                        6***************98776.59999**************999888....899999************99.99***************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.1E-1755139IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MEHNEIIDEE KKRRVNKLLD MMDAKVKECS PEIDSTVQLL PKVGMLFQSE DCAYNFYNQY  60
AKAVGFSVRK DSSTVRADGT VLRRVLCCSK QGLYKDRRLL TNVRVRSRTG CEARIIIRRH  120
GEKFLLIEFN EFHNHELVPP SEVHRLRSQR KIEDSQARIM RNMYHEGIGP ADIYSSMCKR  180
VGGPQNLSFT KLDCVKFLQK IRHDDTVKNV VHSGNSMVVG CHPSLEKCDD CGTSMIVDCK  240
PFLRKGDGLG TSTVSECYPS STFQCNDLAH MALTIVAKGN TSEKSAVFAR KLLTQALEEL  300
DSFIKYDSDK MDHLVDIRNM NHDKRDESKK SVTEVGASIR LRNPPHNKSY ARVSAEKKAA  360
LGKGKGKKRF PKTPKGSYDQ ESIGAIGTTL LMLQDSSVLP KHHHNQVSEQ PDLPQDSSM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5FAN00.0A0A2G5FAN0_AQUCA; Uncharacterized protein
STRINGAquca_001_00496.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-25FAR1-related sequence 5