PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G156100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 375aa    MW: 42355.6 Da    PI: 4.5002
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G156100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29e-06188228853
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                         Er+RR+r+ + +  Lr l+P+      +K +K ++L  A  Y+k+
  Aqcoe7G156100.1.p 188 SERNRRKRLSKQLLSLRALVPNI-----TKIDKRSVLVDAQSYLKN 228
                        6*********************7.....6**************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.846180229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.51E-12182246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.58E-5183234No hitNo description
Gene3DG3DSA:4.10.280.107.4E-8186242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-4186235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MEAQLDTFPF EEPRSPQADI ISSWLDLDDV FFQQELQHSE NHLVNLETDP IFSSLPIPEG  60
SPFMLDTCNF NAEQAGLGSN DGHYQPIFLP AQQCVELDVH DTFLNDYDEF GLISPTDLSP  120
DNNNINDEFC ETTMSGIMNI LDDVEMSEPM VTTVSATESN KIDDDDFNKD DMDDRPKPGT  180
LNSKNMVSER NRRKRLSKQL LSLRALVPNI TKIDKRSVLV DAQSYLKNIH EEIERLQKEL  240
IEQQPRPKLI DLRESSQDNP SGTLRIPRTT STSVAYHKPK TQIREIETEK IGDNKLFVVK  300
ITCKGGAGVG SDVIRVFGSL DFEITHTALE QLQTQEVRVT IFVRVRKQGK MTEQKLKECI  360
TSIALRTGLS LQNP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5F9T80.0A0A2G5F9T8_AQUCA; Uncharacterized protein
STRINGAquca_001_00281.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29930.32e-08bHLH family protein