PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G134900.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Dof | ||||||||
Protein Properties | Length: 220aa MW: 24359.9 Da PI: 8.6008 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.8 | 5.6e-39 | 16 | 76 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCds+ntkfCyynny+lsqPr++Ck+CrryWtkGGalrn+P+Ggg+rk k+s Aqcoe7G134900.2.p 16 EQEHLKCPRCDSSNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGALRNIPIGGGTRKAAKRS 76 57899***************************************************98876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-28 | 11 | 72 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 6.7E-33 | 18 | 74 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.845 | 20 | 74 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 22 | 58 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MQDPSTFLPI KPNFPEQEHL KCPRCDSSNT KFCYYNNYNL SQPRHYCKNC RRYWTKGGAL 60 RNIPIGGGTR KAAKRSSSNP KRPSSSSSSS SSTTSSAQKV VPKPESTGIF SQAIVPVEQD 120 RQLLDITGSF SSLLTSNDHF PLLEGLNHSN GPIPRTFQFG DFTEHSNSSS IENPTLELQT 180 SHNNHDHTFL SIQAGDSSCW TNSNGWPDLA IHTPDLMRK* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00199 | DAP | Transfer from AT1G51700 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010262218.1 | 1e-91 | PREDICTED: dof zinc finger protein DOF3.1 | ||||
Swissprot | O82155 | 2e-41 | DOF17_ARATH; Dof zinc finger protein DOF1.7 | ||||
TrEMBL | A0A2G5F8V9 | 1e-157 | A0A2G5F8V9_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_001_00128.1 | 1e-157 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 5e-39 | DOF zinc finger protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G134900.2.p |
Publications ? help Back to Top | |||
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