PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G115400.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 666aa    MW: 73879.9 Da    PI: 6.2902
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G115400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.81.2e-08550598348
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                        +WT  E  +lv++v ++G g+W+ I +        Rt  ++k++w+++l
  Aqcoe7G115400.2.p 550 AWTLSEVIKLVEGVSKYGAGRWSEIKKVAFasyAYRTSVDLKDKWRNLL 598
                        7**************************99999*99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.303543602IPR017930Myb domain
SuperFamilySSF466895.93E-16545618IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.7E-13545605IPR009057Homeodomain-like
SMARTSM007171.9E-9547600IPR001005SANT/Myb domain
CDDcd116606.08E-19549599No hitNo description
PfamPF002494.0E-7550598IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 666 aa     Download sequence    Send to blast
MEKLAEVQLN EEQRIDESFD SNISSPALSP KQIANPVVYK LVRVEGDGRL VPATDDEVME  60
VENLFEEEKV EARSIVDTGQ VEVCIPDEES PSVEAKTEVS EGKSQGEDTK VDAEKLNARL  120
EYIGVMLQQV KQEENLRLSN ASPKHSSTLM TVDGQCSDQR ENLSAVEEKL QTNHSLKEGP  180
LRTPILNDSS NNQLVSEEIS LKSTDGLAVG GSSASVPASC SSSMPDFSRI KGEICLDNQT  240
VRELQETFRA TFGRETTVKD KLWLKRRIAM GLTNSCDVST TTFTIKDNVL VRTKAKDTQS  300
VMEICKNTSQ TNEMVYDSCK DVATIPAVKV GDQQVLFCKR LRKPEVDNEC KEDVCTEQSA  360
SKRVRKPTKR YIEELSESDT RECAGRCESS TKHSGNGHFS PKSIISPVCV FSTDETALIT  420
RQDSFGGSGV QVPYVSRMRR GRPRENFMSI MQYHPNGMGM SVDVAKSALG ARISQQDNET  480
GEKNWKDRAT PKHNQQQMVA KTEPEKENVV KCIDEPETVY FDNIDSGDNS DCNLTSPTSK  540
YGVRRKHHRA WTLSEVIKLV EGVSKYGAGR WSEIKKVAFA SYAYRTSVDL KDKWRNLLRA  600
SFAQGSNDKG MRNSRKHGSM PIPAPILLRV RQLAEKDSGG TPDLSSSKFI GCSGRSVLDS  660
RSGYL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002274215.10.0PREDICTED: uncharacterized protein LOC100263481 isoform X3
TrEMBLA0A2G5C8V90.0A0A2G5C8V9_AQUCA; Uncharacterized protein
STRINGAquca_076_00106.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.21e-119TRF-like 6