PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G108100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 181aa    MW: 19919 Da    PI: 4.8384
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G108100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-192473255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       +ykGVr++k +g+WvAeIr p   + +  r++lg++ tae+Aa+a++aa  +++g
  Aqcoe7G108100.1.p 24 RYKGVRRRK-WGKWVAEIRLP---N-CrDRVWLGSYETAEKAARAYDAAVYCIRG 73
                       6*****998.**********8...3.45************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-132473IPR001471AP2/ERF domain
CDDcd000183.05E-292483No hitNo description
SuperFamilySSF541715.36E-212482IPR016177DNA-binding domain
PROSITE profilePS5103222.9062481IPR001471AP2/ERF domain
SMARTSM003801.4E-342487IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-292482IPR001471AP2/ERF domain
PRINTSPR003675.8E-102536IPR001471AP2/ERF domain
PRINTSPR003675.8E-104763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MVKPESINRG QRNNNGCNGS GSVRYKGVRR RKWGKWVAEI RLPNCRDRVW LGSYETAEKA  60
ARAYDAAVYC IRGPTAEFNF PTAAPPELPD SPSKLTHQQI QTVAAEYANQ EVVAPMEDGH  120
GRQTVPESTS TATTPNSNVF DIPTTSNVED IVNWDSIDST LILESCDFFG PNFDGFLGDF  180
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-161481272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12531KGVRRRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9C5916e-38ERF16_ARATH; Ethylene-responsive transcription factor ERF016
TrEMBLA0A2G5C8H31e-132A0A2G5C8H3_AQUCA; Uncharacterized protein
STRINGAquca_076_00040.11e-133(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.15e-40ERF family protein