PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G104900.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 427aa    MW: 47782.2 Da    PI: 4.5578
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G104900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18113162255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        +y+G+r+++ +g+W+AeIrdp+    + +r +lg+f taeeAa+a++a +++++g
  Aqcoe7G104900.2.p 113 QYRGIRRRP-WGKWAAEIRDPV----KgARLWLGTFKTAEEAARAYDAEARRIRG 162
                        69*******.**********75....44************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.7E-36113176IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-22113172IPR016177DNA-binding domain
PROSITE profilePS5103224.381113170IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-32113171IPR001471AP2/ERF domain
CDDcd000181.12E-33113171No hitNo description
PfamPF008478.5E-11114162IPR001471AP2/ERF domain
PRINTSPR003673.4E-11114125IPR001471AP2/ERF domain
PRINTSPR003673.4E-11136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MCGGAIISDF IPPIPRSSRR LTADFLWPNN NKKPTLLHFN AGDDDFEADF QEFQENCYEK  60
EGKEDEEEED YKIDEQTLFS NFAPKFVCSQ KRVSAVEANE SVEKSGKNKK KNQYRGIRRR  120
PWGKWAAEIR DPVKGARLWL GTFKTAEEAA RAYDAEARRI RGKKAKLNFP DEVPPTAGNL  180
TRKTNPKKRV FKASASFDDE HPLDVEQKAV KSKLQKLLPK ASPILEESNL NLNLTLNDNF  240
NVWSNPGHNF FDSHDFMEEE VSANSSKLTG SFSMIENPTE LDTLTLPDGA SLIKSDQGSN  300
PMNGSNIGLK DCHSEAPEIP PGLSSLVSEA SYSAEDANMN KRLETAENAN MNKKLETISE  360
TGPGEGNTTK KLQEDLLDFE SELNFLEIPN FESCNAAMES LLNGDDECKI DMWSLDDFLL  420
PMDGIF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22113173263ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105111GKNKKKN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5C8C50.0A0A2G5C8C5_AQUCA; Uncharacterized protein
STRINGAquca_076_00008.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.35e-35related to AP2 2