PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G048900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 247aa    MW: 26546.5 Da    PI: 4.4677
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G048900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.16.9e-1681129255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                         y+G+r ++ +g+Wv+eIr+p++   ++r++lg+f t+e+Aa a++ a+++l+g
  Aqcoe7G048900.1.p  81 IYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPTPEMAATAYDVAALALKG 129
                        69***9.55.6*********843...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.4E-980129IPR001471AP2/ERF domain
CDDcd000184.99E-2980139No hitNo description
SMARTSM003801.7E-3081143IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-2781139IPR001471AP2/ERF domain
PROSITE profilePS5103220.53481137IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-1881139IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MAEEPHANVN VNVIVNASSS SANMRQQDHL PLPQPTLISE LPDPNPQPQS PTPQQLSSSS  60
SPKPQQPPPN SPTMTTGKHP IYRGIRCRSG KWVSEIREPR KTTRIWLGTF PTPEMAATAY  120
DVAALALKGR DAILNFPESV SSYPILASAS PSDIRTAATA AAAMRAPKSD DREPAEKSND  180
ESSSDNKCVE SASDDVFIDE EAIFDMPNLL MNMAEGMLVS PPRMDSSPLS DSSPSNSDGE  240
SLWSYP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-15791411276Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278525.12e-75PREDICTED: ethylene-responsive transcription factor ERF026-like
SwissprotQ9FJ901e-51ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A2G5E1K61e-122A0A2G5E1K6_AQUCA; Uncharacterized protein
STRINGAquca_013_00433.11e-123(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-36ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]