PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G033500.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family BES1
Protein Properties Length: 737aa    MW: 82954.2 Da    PI: 5.1654
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G033500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822135.55.7e-4291189199
             DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 
                        gg++r ++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++  s+ + ++ a  +s++a +++
  Aqcoe7G033500.3.p  91 GGGRRCRPREEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGT-RPVALATSSNALVTT 181
                        5889999***************************************************************877777.666667777766666 PP

             DUF822  93 slq.sslk 99 
                        s + ss++
  Aqcoe7G033500.3.p 182 SPSpSSPQ 189
                        65523332 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.4E-3892202IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.02E-191293732IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.1E-210296732IPR013781Glycoside hydrolase, catalytic domain
PfamPF013733.5E-113302722IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.5E-76333347IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.5E-76354372IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.5E-76376397IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060380388IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008426.8E-9459468IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007507.5E-76469491IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.5E-76542561IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.5E-76576592IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.5E-76593604IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.5E-76611634IPR001554Glycoside hydrolase, family 14
PRINTSPR008426.8E-9614624IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007507.5E-76651673IPR001554Glycoside hydrolase, family 14
PRINTSPR008426.8E-9702716IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008426.8E-9717731IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    Send to blast
MEQEMERFGG TSEEEGEEDE EEMGMEVKDE EQQQQERRSQ RNHLSTRMIS INEGINNTGI  60
NNNNNLLNRF QYVSPQQQQQ QDEQNQSSSG GGGRRCRPRE EKERTKLRER HRRAITARIL  120
AGLRRHGNYN LRVRADINDV IAALAREAGW VVLPDGTTFP SRSQGTRPVA LATSSNALVT  180
TSPSPSSPQL IPTIVQSPNA SFRGGGGGGG ISPGIQNSSD YNPYRLKTMF VPCSTPIDGS  240
SNVIRSTSVA AMVGDRGERI QDSNSPLIDN CIDSIIDDKQ IMDIPSKMPE RDFAGTPYVP  300
VYVMLPLGVI NMKCELVDPD GLLKQLRILK AVNVDGVMVD CWWGIVEAHT PQEYNWSGYK  360
QLFQIVRELK LKLQVVMSFH ECGGNVGDDV CIPLPQWVAE IGRTNPDIFF TDREGRRNPE  420
CLSWGIDKER VLRGRTAVEV YFDYMRSFRV EFDEFFEDGV ISEIEVGLGP CGELRYPSYS  480
VKNGWRYPGI GEFQCYDQYL LKSLKKAAEA RGHSFWARGP DNAGSYNSQP HDTGFFCDGG  540
DYDSYYGRFF LNWYSQVLVD HADRVLSLAK LAFEGTCIAT KLSGIHWWYK TASHAAELTA  600
GFYNPCNRDG YAAIASMLKK HGAALNFTCV ELRTLDQQED FPEALADPEG LVWQVLNAAW  660
DVCIPVASEN ALPCHDREGY NKILENAKPM NDPDGRHLSA FTYLRLCPVL MDRHNFMEFE  720
RFVKRMHGEA VMDLQM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1uko_A1e-16129872911444Beta-amylase
1uko_B1e-16129872911444Beta-amylase
1uko_C1e-16129872911444Beta-amylase
1uko_D1e-16129872911444Beta-amylase
1ukp_A1e-16129872911444Beta-amylase
1ukp_B1e-16129872911444Beta-amylase
1ukp_C1e-16129872911444Beta-amylase
1ukp_D1e-16129872911444Beta-amylase
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010255372.10.0PREDICTED: beta-amylase 7-like isoform X2
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A2G5E0V50.0A0A2G5E0V5_AQUCA; Beta-amylase
STRINGAquca_013_00313.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]