PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G033500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | BES1 | ||||||||
Protein Properties | Length: 737aa MW: 82954.2 Da PI: 5.1654 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 135.5 | 5.7e-42 | 91 | 189 | 1 | 99 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 gg++r ++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ s+ + ++ a +s++a +++ Aqcoe7G033500.1.p 91 GGGRRCRPREEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGT-RPVALATSSNALVTT 181 5889999***************************************************************877777.666667777766666 PP DUF822 93 slq.sslk 99 s + ss++ Aqcoe7G033500.1.p 182 SPSpSSPQ 189 65523332 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 4.4E-38 | 92 | 202 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
SuperFamily | SSF51445 | 1.02E-191 | 293 | 732 | IPR017853 | Glycoside hydrolase superfamily |
Gene3D | G3DSA:3.20.20.80 | 1.1E-210 | 296 | 732 | IPR013781 | Glycoside hydrolase, catalytic domain |
Pfam | PF01373 | 3.5E-113 | 302 | 722 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 7.5E-76 | 333 | 347 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 7.5E-76 | 354 | 372 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 7.5E-76 | 376 | 397 | IPR001554 | Glycoside hydrolase, family 14 |
PROSITE pattern | PS00506 | 0 | 380 | 388 | IPR018238 | Glycoside hydrolase, family 14, conserved site |
PRINTS | PR00842 | 6.8E-9 | 459 | 468 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 7.5E-76 | 469 | 491 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 7.5E-76 | 542 | 561 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 7.5E-76 | 576 | 592 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 7.5E-76 | 593 | 604 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 7.5E-76 | 611 | 634 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 6.8E-9 | 614 | 624 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 7.5E-76 | 651 | 673 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 6.8E-9 | 702 | 716 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00842 | 6.8E-9 | 717 | 731 | IPR001371 | Glycoside hydrolase, family 14B, plant |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000272 | Biological Process | polysaccharide catabolic process | ||||
GO:0048831 | Biological Process | regulation of shoot system development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 737 aa Download sequence Send to blast |
MEQEMERFGG TSEEEGEEDE EEMGMEVKDE EQQQQERRSQ RNHLSTRMIS INEGINNTGI 60 NNNNNLLNRF QYVSPQQQQQ QDEQNQSSSG GGGRRCRPRE EKERTKLRER HRRAITARIL 120 AGLRRHGNYN LRVRADINDV IAALAREAGW VVLPDGTTFP SRSQGTRPVA LATSSNALVT 180 TSPSPSSPQL IPTIVQSPNA SFRGGGGGGG ISPGIQNSSD YNPYRLKTMF VPCSTPIDGS 240 SNVIRSTSVA AMVGDRGERI QDSNSPLIDN CIDSIIDDKQ IMDIPSKMPE RDFAGTPYVP 300 VYVMLPLGVI NMKCELVDPD GLLKQLRILK AVNVDGVMVD CWWGIVEAHT PQEYNWSGYK 360 QLFQIVRELK LKLQVVMSFH ECGGNVGDDV CIPLPQWVAE IGRTNPDIFF TDREGRRNPE 420 CLSWGIDKER VLRGRTAVEV YFDYMRSFRV EFDEFFEDGV ISEIEVGLGP CGELRYPSYS 480 VKNGWRYPGI GEFQCYDQYL LKSLKKAAEA RGHSFWARGP DNAGSYNSQP HDTGFFCDGG 540 DYDSYYGRFF LNWYSQVLVD HADRVLSLAK LAFEGTCIAT KLSGIHWWYK TASHAAELTA 600 GFYNPCNRDG YAAIASMLKK HGAALNFTCV ELRTLDQQED FPEALADPEG LVWQVLNAAW 660 DVCIPVASEN ALPCHDREGY NKILENAKPM NDPDGRHLSA FTYLRLCPVL MDRHNFMEFE 720 RFVKRMHGEA VMDLQM* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1uko_A | 1e-161 | 298 | 729 | 11 | 444 | Beta-amylase |
1uko_B | 1e-161 | 298 | 729 | 11 | 444 | Beta-amylase |
1uko_C | 1e-161 | 298 | 729 | 11 | 444 | Beta-amylase |
1uko_D | 1e-161 | 298 | 729 | 11 | 444 | Beta-amylase |
1ukp_A | 1e-161 | 298 | 729 | 11 | 444 | Beta-amylase |
1ukp_B | 1e-161 | 298 | 729 | 11 | 444 | Beta-amylase |
1ukp_C | 1e-161 | 298 | 729 | 11 | 444 | Beta-amylase |
1ukp_D | 1e-161 | 298 | 729 | 11 | 444 | Beta-amylase |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010255372.1 | 0.0 | PREDICTED: beta-amylase 7-like isoform X2 | ||||
Swissprot | O80831 | 0.0 | BAM7_ARATH; Beta-amylase 7 | ||||
TrEMBL | A0A2G5E0V5 | 0.0 | A0A2G5E0V5_AQUCA; Beta-amylase | ||||
STRING | Aquca_013_00313.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 0.0 | beta-amylase 7 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G033500.1.p |
Publications ? help Back to Top | |||
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