PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G005100.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Dof | ||||||||
Protein Properties | Length: 227aa MW: 25095.6 Da PI: 8.3589 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.6 | 7.5e-40 | 38 | 99 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt GG+lrnvPvGgg+rknk+sss Aqcoe7G005100.2.p 38 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTDGGSLRNVPVGGGSRKNKRSSS 99 7899******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 7.0E-26 | 30 | 87 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.2E-33 | 40 | 96 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.106 | 42 | 96 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 44 | 80 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MDTAQWPQEI GLVKPIEGMV NNTCSSRPMI ERKARPQKEQ ALNCPRCNST NTKFCYYNNY 60 SLTQPRYFCK TCRRYWTDGG SLRNVPVGGG SRKNKRSSSS STSSGSASAS SKKLSDHITS 120 QSQNPKIHEG HDLNLSFQIT EPYQNISEYV DQDFKPTLNF GVDHGLGGSG YGNIHQGGVQ 180 ESSSGRLLFP FEDLRQVSTI TSEFEQNRGH GDSNGYWSGM LDGGSW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021638405.1 | 2e-93 | dof zinc finger protein DOF4.6-like isoform X2 | ||||
Swissprot | Q8LAP8 | 2e-52 | DOF46_ARATH; Dof zinc finger protein DOF4.6 | ||||
TrEMBL | A0A2G5DZG9 | 1e-168 | A0A2G5DZG9_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_013_00047.1 | 1e-169 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 8e-44 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G005100.2.p |
Publications ? help Back to Top | |||
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