PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G005100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Dof | ||||||||
Protein Properties | Length: 290aa MW: 31857.9 Da PI: 8.1319 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126 | 1.2e-39 | 38 | 99 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt GG+lrnvPvGgg+rknk+sss Aqcoe7G005100.1.p 38 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTDGGSLRNVPVGGGSRKNKRSSS 99 7899******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 9.0E-26 | 30 | 87 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.8E-33 | 40 | 96 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.106 | 42 | 96 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 44 | 80 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MDTAQWPQEI GLVKPIEGMV NNTCSSRPMI ERKARPQKEQ ALNCPRCNST NTKFCYYNNY 60 SLTQPRYFCK TCRRYWTDGG SLRNVPVGGG SRKNKRSSSS STSSGSASAS SKKLSDHITS 120 QSQNPKIHEG HDLNLSFQIT EPYQNISEYV DQVPNIDNNN NNNHNNNHNP SSTSSSLSAL 180 ELLRTGITSR GLNSFMPMPI PESNTSYSSS GFAMQDFKPT LNFGVDHGLG GSGYGNIHQG 240 GVQESSSGRL LFPFEDLRQV STITSEFEQN RGHGDSNGYW SGMLDGGSW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010252779.1 | 1e-127 | PREDICTED: dof zinc finger protein DOF4.6-like isoform X1 | ||||
Swissprot | Q8LAP8 | 3e-69 | DOF46_ARATH; Dof zinc finger protein DOF4.6 | ||||
TrEMBL | A0A1U7ZI96 | 1e-125 | A0A1U7ZI96_NELNU; dof zinc finger protein DOF4.6-like isoform X1 | ||||
STRING | XP_010252779.1 | 1e-126 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 5e-54 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G005100.1.p |
Publications ? help Back to Top | |||
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