PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe6G175100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Nin-like

Protein Properties

Length: 328aa MW: 37280.2 Da PI: 9.7649

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe6G175100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.1	5.5e-26	206	255	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +ei l+dl kyF+lpi++A+k L+v+lTvLKr+CR++GI+RWPhRkiksl Aqcoe6G175100.1.p 206 AEIALDDLVKYFDLPITEASKILKVGLTVLKRKCRELGIPRWPHRKIKSL 255 789*********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	19.27	191	275	IPR003035	RWP-RK domain
Pfam	PF02042	4.6E-21	208	255	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MESSKAPVLS ALGVFKNVIN EELIRSLHVY QLEDGNEIGV EREFLFSTTS SYVEMIAQPV 60 LKLSKVKMSE LYEGQMMGIW FCMLVFNICA PSRLTPIPPI LLISRNPKLK SIPTLVDDLQ 120 KVFQLTYGAK NKQPAVIEDT SGGEVNSDNC PTERVFSVLD QDLNCLPNAT GVPPSAEKQK 180 SVQSPTDDAQ KKTKNTRKKA VSERIAEIAL DDLVKYFDLP ITEASKILKV GLTVLKRKCR 240 ELGIPRWPHR KIKSLDTLIH DLQEEAERQE RENEVAAMAV NKRKRMLENE KESIARKPFM 300 DIQSETKRFR QDVFKRRHRA RNLKNKS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020532738.1	1e-128	protein RKD5
TrEMBL	A0A2G5DTA2	0.0	A0A2G5DTA2_AQUCA; Uncharacterized protein
STRING	Aquca_015_00350.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	1e-82	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Aqcoe6G175100.1.p