PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe6G157500.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 367aa MW: 40281.3 Da PI: 8.9442

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe6G157500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.9	6.2e-40	28	87	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGGalrnvPvGgg+rknkk + Aqcoe6G157500.1.p 28 EPALKCPRCDSPNTKFCYYNNYNLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKKIK 87 6789*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-26	27	83	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.7E-33	30	85	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.758	31	85	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	33	69	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0010052	Biological Process	guard cell differentiation
GO:0010118	Biological Process	stomatal movement
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:1902066	Biological Process	regulation of cell wall pectin metabolic process
GO:0005634	Cellular Component	nucleus
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence Send to blast
MMSSDNIPAK PANKDNHRKT GSSPRPPEPA LKCPRCDSPN TKFCYYNNYN LSQPRHFCKT 60 CRRYWTKGGA LRNVPVGGGC RKNKKIKSSS RLSDDSKDSG GGSYDSTGFK FFHHHGAVSP 120 AMEFHYGRLP FSRLNSPSSS NNVYNHLLSF GDLSAASTTP TTTSSAPLNA GTMNHPFDNI 180 ETPTPHTSGS LMGFNNYPIR QGDHHQTGGF NWGIHQDNLS MNAHSNLASS IESLSSINQD 240 LHWKLQQQRL AMLYVGENQK EGNNNTTATT QGGIHDNQMA QNPQPLLFQN LEISKPEASV 300 VGNNPLMKSG ILGTNNNTTE WLFENSYTPA TTTTTSSNSN GNDGINNWNN GVQVWSDMHR 360 YNGLPQ*

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence Send to blast

MMSSDNIPAK PANKDNHRKT GSSPRPPEPA LKCPRCDSPN TKFCYYNNYN LSQPRHFCKT  60
CRRYWTKGGA LRNVPVGGGC RKNKKIKSSS RLSDDSKDSG GGSYDSTGFK FFHHHGAVSP  120
AMEFHYGRLP FSRLNSPSSS NNVYNHLLSF GDLSAASTTP TTTSSAPLNA GTMNHPFDNI  180
ETPTPHTSGS LMGFNNYPIR QGDHHQTGGF NWGIHQDNLS MNAHSNLASS IESLSSINQD  240
LHWKLQQQRL AMLYVGENQK EGNNNTTATT QGGIHDNQMA QNPQPLLFQN LEISKPEASV  300
VGNNPLMKSG ILGTNNNTTE WLFENSYTPA TTTTTSSNSN GNDGINNWNN GVQVWSDMHR  360
YNGLPQ*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012081705.1	1e-122	dof zinc finger protein DOF5.7
TrEMBL	A0A2G5DSL8	0.0	A0A2G5DSL8_AQUCA; Uncharacterized protein
STRING	Aquca_015_00212.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	2e-46	Dof family protein

Link Out ? help Back to Top
Phytozome	Aqcoe6G157500.1.p