PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe6G107900.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | TALE | ||||||||
Protein Properties | Length: 826aa MW: 89641.1 Da PI: 6.9106 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.3 | 3e-09 | 597 | 634 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + Aqcoe6G107900.2.p 597 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 634 664459******************************88 PP | |||||||
2 | BELL | 124.7 | 3.7e-40 | 457 | 528 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r ++q+kk+kLls+l+eVd+rY++y+eq+q+v++sF+ v+g gsa+pYt+lA+ka+SrhFrcLkdai+ q+ Aqcoe6G107900.2.p 457 DRIDHQRKKTKLLSMLDEVDRRYNHYCEQMQVVVNSFDSVMGFGSATPYTALAQKAMSRHFRCLKDAITTQL 528 5789*****************************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 2.5E-79 | 383 | 526 | IPR006563 | POX domain |
Pfam | PF07526 | 2.1E-52 | 389 | 525 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.568 | 575 | 638 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.83E-12 | 578 | 639 | No hit | No description |
SMART | SM00389 | 1.2E-9 | 578 | 642 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 3.98E-17 | 580 | 645 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.0E-28 | 581 | 644 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 4.2E-18 | 595 | 634 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 826 aa Download sequence Send to blast |
MRATTLPPPL FILNTQKSTN SVVKSMSKGF NHQGINISFS SNEFQDHQLQ QQQQSHITQQ 60 GRRDKLRVQA AGGFDAPPAS LVAIEPEEEE VPGGGGMAPV YETSGMWSDM FNYQSGGTTS 120 TSTEFLENQI SSSNYHRLHH REAAVAPPVG VVANEWYGNR QGMVGGFGMG PLGDSKQQTN 180 NSDNRDSNII AQNHQISSLN ADSAAAMQLF LMNPQPRSPS PSPTTTSSTP LHLLLPNQQQ 240 SSSHHSNLQQ HFHNSAAAAF ANSPASQFQW VSSSSSSGVG NNTAAQTQLN KIGTAIENQG 300 LSLTLSTSLQ HLEAAKAEEF RMGEDGVFYY DQGSGIGGGS GSSSSASVAF QLKNYIPHNQ 360 AIHLQGIVNQ NQMMNTAGLR SPIGVMSLLR NSKYSKAAQE LLEEFCSVGR GHLKKHRSLA 420 RNNSINQAST ASFGGGGGGG NGSSSSSKEL TSLSAADRID HQRKKTKLLS MLDEVDRRYN 480 HYCEQMQVVV NSFDSVMGFG SATPYTALAQ KAMSRHFRCL KDAITTQLKQ TCELLGEKDS 540 AGVSGVTKGE TPRLKLLEQS LRQQRAFHQM GMMEQEAWRP QRGLPERSVN ILRAWLFEHF 600 LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMV EEMYQQEAKE EDADEDERES 660 NQTNSNTAQT PMPTTAATTT TTQPVSTAAT IPTTTSSATT TVAGKRSQIN DLDNDPSLNA 720 INTQCFSENQ VMQANLTTTT TTTTSHADVS SYGTLHSDVS HFDPSCHVSS IIADDYRTTS 780 GNAEMASTLV RFGTTMGDVS LTLGLRHAGN LPEKNNFSVR DFGGC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 2e-16 | 584 | 642 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 2e-16 | 584 | 642 | 5 | 63 | Homeobox protein Meis2 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF406699 | 1e-111 | AF406699.1 Solanum tuberosum BEL1-related homeotic protein 13 (Bel13) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010254984.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 4 | ||||
Swissprot | Q9SW80 | 1e-155 | BLH2_ARATH; BEL1-like homeodomain protein 2 | ||||
TrEMBL | A0A2G5EA92 | 0.0 | A0A2G5EA92_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_010_00398.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23760.3 | 1e-138 | BEL1-like homeodomain 4 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe6G107900.2.p |
Publications ? help Back to Top | |||
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