PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe6G097000.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 343aa MW: 37150.2 Da PI: 8.724

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe6G097000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.9	2.2e-38	62	119	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCds ntkfCyynny+l+qPryfCk+CrryWtkGGalrnvP+Ggg+rknk++ Aqcoe6G097000.1.p 62 ENLRCPRCDSPNTKFCYYNNYNLTQPRYFCKTCRRYWTKGGALRNVPIGGGCRKNKST 119 6789***************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-25	61	117	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.4E-32	63	118	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.217	64	118	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	66	102	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence Send to blast
MIQELFGGAG LLGAGERKFS FHGAVLEGLP SSSSLPSFPP PSSTTTTTTT TTTTTTPTPC 60 PENLRCPRCD SPNTKFCYYN NYNLTQPRYF CKTCRRYWTK GGALRNVPIG GGCRKNKSTL 120 VSTSAGKSTA GKAKPVSSDV VKLNLGSVFE QEQSPNPILW GSPQNSQLLA LLRATPNPNP 180 NSSSISNFVD FKNEGHMIGS QVSSDQSAAV TGALNAKTLG LDPMGQVPIG LYSSFFRNNQ 240 QQQLQHQQHN QHHQQQQQQQ NMSLHADLQN TGIQEFYQRL KASVNYYPDH SSAAMNNVNT 300 SMSSSASTIM DQAPTTAGEF NCWNPPFSWS NSDLPATNGA FH*

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence Send to blast

MIQELFGGAG LLGAGERKFS FHGAVLEGLP SSSSLPSFPP PSSTTTTTTT TTTTTTPTPC  60
PENLRCPRCD SPNTKFCYYN NYNLTQPRYF CKTCRRYWTK GGALRNVPIG GGCRKNKSTL  120
VSTSAGKSTA GKAKPVSSDV VKLNLGSVFE QEQSPNPILW GSPQNSQLLA LLRATPNPNP  180
NSSSISNFVD FKNEGHMIGS QVSSDQSAAV TGALNAKTLG LDPMGQVPIG LYSSFFRNNQ  240
QQQLQHQQHN QHHQQQQQQQ NMSLHADLQN TGIQEFYQRL KASVNYYPDH SSAAMNNVNT  300
SMSSSASTIM DQAPTTAGEF NCWNPPFSWS NSDLPATNGA FH*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018826400.1	1e-112	PREDICTED: dof zinc finger protein DOF5.3-like
TrEMBL	A0A2G5E9B7	0.0	A0A2G5E9B7_AQUCA; Uncharacterized protein
STRING	Aquca_010_00309.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	5e-35	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Phytozome	Aqcoe6G097000.1.p