PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe6G066000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Nin-like | ||||||||
Protein Properties | Length: 999aa MW: 110831 Da PI: 5.667 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 88.4 | 5.9e-28 | 592 | 643 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yF+ ++kdAAk+Lgvc+T++KriCR++GI+RWP+Rki+++ Aqcoe6G066000.1.p 592 AEKSISLDVLQQYFAVSLKDAAKSLGVCPTTMKRICRNHGISRWPSRKINKV 643 589***********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.348 | 582 | 663 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.6E-25 | 596 | 643 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 2.16E-20 | 898 | 987 | No hit | No description |
SMART | SM00666 | 2.3E-19 | 903 | 985 | IPR000270 | PB1 domain |
PROSITE profile | PS51745 | 19.398 | 903 | 985 | IPR000270 | PB1 domain |
Gene3D | G3DSA:3.10.20.240 | 9.4E-20 | 904 | 984 | No hit | No description |
Pfam | PF00564 | 1.0E-14 | 905 | 984 | IPR000270 | PB1 domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0010167 | Biological Process | response to nitrate | ||||
GO:0042128 | Biological Process | nitrate assimilation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 999 aa Download sequence Send to blast |
MYEAEEENSS IDSKTSSTLP LSSTVEQQYS SLMDFDFDID SSWPFDRNIF TSNPSSPNYL 60 LSLASSPLRN PTFSEHQSFP NWVFLDEDDE KSSFKANSLS NCNTINGNSV RDKNKRKFLP 120 ASVGMLPVEM QDGSSVIKEK MLQALQHFKE SMDQHILAQI WAPVKKGDHY VLTTSGQPFV 180 LDPQSNGLLQ YRTVSLMYMF SLEGESDGEL GLPGRVFRQK LPEWTPDVQY YSSKEYPRLN 240 HALCYNVRGT LALPVFEPSK QSCLGVIELI MMSQKINYAP EVDKVCKALE AVNLKSSDSL 300 DHPSFQICND GRQYALAEIL EILTVVCETH RLPLAQTWVP CQHRKILADG GGVEKSCMSF 360 DGSCMGQVCM STTDVAFYVV DAHMWGFRDA CSEHHLQKGQ GVAGRAFSSK GSCFSMDITQ 420 FSKTQYPLAH YAQMFGLSSC FAICLCSTHT GTDDYILEFF LPPGIMDLSE QLTFVNSVLA 480 TMKHHCRSLK VASKDELGEE KPVEIIETST DKNLDLRFKS TQTSSQIKSP GEPNSLSNQG 540 CTQKTDLFEK QSMVEMGDPR NGDNAVSMST NHTTLSGNKG MKKTLEKKKG KAEKSISLDV 600 LQQYFAVSLK DAAKSLGVCP TTMKRICRNH GISRWPSRKI NKVNHSISKL NRVIESVQGA 660 ERAFDLTSFN TSPGPIFVGS LSWPVCLNGP KEQHSTDPNL FEFQRGKETN LSTRTEPETY 720 DGKIGIKILE MDDLSTHQEQ FLNPGGLHSE LGKGSSFMKI RSGSGEESTE TPTSHGSCQG 780 SPINETTITN DVFISSVQGP GESNRSFLGV KPQPSEQLNI FSSHSTPEAP FMTQQPPLGG 840 MLIEDAGSSK DLRKLSNLVS ELEEWELESN SKNHVCPGNV PPEGMNPNGH TMPHITAAED 900 TKILTFKVNY QDDIIRFRLP VTSGMHELMG EVAKRFKLEV GTFSMKYLDD DHEWVSLACD 960 TDWQECMDNS GLSGKRVTRL MVHEIIADLG SSCESLRG* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00449 | DAP | Transfer from AT4G24020 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010267558.1 | 0.0 | PREDICTED: protein NLP6-like isoform X2 | ||||
Swissprot | Q5NB82 | 0.0 | NLP3_ORYSJ; Protein NLP3 | ||||
TrEMBL | A0A2G5E7U0 | 0.0 | A0A2G5E7U0_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_010_00024.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 0.0 | NIN like protein 7 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe6G066000.1.p |