PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe6G064600.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 279aa MW: 31342.9 Da PI: 9.9245

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe6G064600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39	1.4e-12	111	158	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er RR+++ + f L +++P + +K++Ka+iL A++Y+k+L+ Aqcoe6G064600.1.p 111 TEHAMAERIRREKLSQHFTALSSIVPGL-----TKMDKASILGTAIKYLKKLE 158 579**********************9.....9**************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	15.135	108	157	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.8E-16	111	171	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.4E-10	111	158	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.44E-15	112	171	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.86E-12	113	159	No hit	No description
SMART	SM00353	5.1E-13	114	163	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MNNKSTFSFT PIETSQTCFE SSRNPDVKSH DHWNSSNTMK SSSSVKKDVS CSSKVLSFGS 60 LESPKSSHKF NGNFIGVKRP KEEIESIGYM TFDLPDVMIS QSSRSSQGST TEHAMAERIR 120 REKLSQHFTA LSSIVPGLTK MDKASILGTA IKYLKKLEER AKMLEEKTTK KKTESVVYVN 180 KSKKKSNGWY DENLPEVEAR VSTNSVMLRV HCEKHKGVLV NILAEIEKFH LTVVSSSIMP 240 FGKFALEISV TAQMDVEFNM TEKDLVTNLR SAFLQFMR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A200Q156	6e-71	A0A200Q156_9MAGN; Myc-type

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	3e-38	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe6G064600.1.p