PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G048300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 205aa    MW: 23327.8 Da    PI: 5.8934
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G048300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.53.1e-29118176159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        +dDgy+WrKYG+K+vk+s++pr+YYrC + gC+vkk+ver++ed ++v++tY g H+he
  Aqcoe6G048300.1.p 118 MDDGYKWRKYGKKSVKNSPNPRNYYRCNHVGCQVKKRVEREREDSSYVITTYDGVHTHE 176
                        59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-32106178IPR003657WRKY domain
SuperFamilySSF1182905.49E-28110178IPR003657WRKY domain
PROSITE profilePS5081129.757113178IPR003657WRKY domain
SMARTSM007741.4E-33118177IPR003657WRKY domain
PfamPF031063.1E-23119176IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MSGYSSLPTN MPEQYSNLNH GYTYLMDHLD ISDMDFEVSD FLVPEAGGTS EEDSTTTHIE  60
YEPSNPVLPE QFDESVGHDG SGDKRRPNNI KPKSAKKTKM DVGQFRVAFR TKSELEIMDD  120
GYKWRKYGKK SVKNSPNPRN YYRCNHVGCQ VKKRVERERE DSSYVITTYD GVHTHESPSI  180
VYYNEMPLMV PNGWTLQASQ SSCS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-23106178274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269|PubMed:21030507}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261070.13e-71PREDICTED: probable WRKY transcription factor 51 isoform X1
SwissprotQ93WU91e-42WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBLA0A2G5DWH41e-152A0A2G5DWH4_AQUCA; Uncharacterized protein
STRINGAquca_014_00461.11e-153(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.15e-45WRKY DNA-binding protein 51
Publications ? help Back to Top
  1. Yan C, et al.
    Injury Activates Ca2+/Calmodulin-Dependent Phosphorylation of JAV1-JAZ8-WRKY51 Complex for Jasmonate Biosynthesis.
    Mol. Cell, 2018. 70(1): p. 136-149.e7
    [PMID:29625034]