PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G239900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 230aa    MW: 26357.6 Da    PI: 5.3636
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G239900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.5e-09123163954
                        HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Aqcoe5G239900.1.p 123 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 163
                        699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.951114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.24E-14119173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.0E-13120174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.20E-10120168No hitNo description
SMARTSM003534.0E-13120169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-6124163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010197Biological Processpolar nucleus fusion
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MNTNHNSNPW ELDMAMDNQN PIFHDQFTYD LVCHQQNYPF QTTHEVPAST HLSDPIYPSN  60
NQVENPRELQ QEEPEEEEEK LSVMKEMMYK IAAMQPVDID PSTIRKPKRR NVRISDDPQS  120
VAARHRRERI SEKIRILQRL VPGGTKMDTA SMLDEAIRYV KFLKRLVRKL QSDQNPQSLG  180
DTWPIRPENI LGSTASPVEP LLGQVGFSFQ GGDININGNI PCEQADHDR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021683564.13e-64transcription factor HEC3-like
TrEMBLA0A2G5DEA01e-102A0A2G5DEA0_AQUCA; Uncharacterized protein
STRINGAquca_022_00317.11e-103(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.14e-45bHLH family protein