PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe5G237500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Dof | ||||||||
Protein Properties | Length: 300aa MW: 33303.6 Da PI: 4.9699 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 114.9 | 3.4e-36 | 31 | 85 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvP Ggg+rk ++ Aqcoe5G237500.1.p 31 PNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPFGGGCRKTRR 85 58**************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-28 | 17 | 85 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.8E-31 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.192 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 33 | 69 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence Send to blast |
MFNNPTDKLF SPHSGPLMMD PRWKTNVEIA PNCPRCASTN TKFCYYNNYS LSQPRYFCKG 60 CRRYWTKGGS LRNVPFGGGC RKTRRGKAVR SSSSHDLGRV GSSYSPSSQP SFDGNSGSSD 120 GNFEDSSLSG KAGSNIDLAD VFSKFLHQDS GSSDTSSAVP DISDPDYDQP VRFGHHFQQE 180 NIIIDGIIPE NPILDMEFTG VIQPEFDVIN TERLQQYTDP GIETGLEGLQ AFLNDGIAQD 240 ILWSESPALP NFSWQQNQHL QGYGCDEAAV LDDHSMFHNN LLNGNWNSFD IPSYAYYKK* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 2e-36 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe5G237500.1.p |