PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G183600.4.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family TALE
Protein Properties Length: 414aa    MW: 46639.9 Da    PI: 7.1576
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G183600.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.53.1e-103363731954
                        HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
           Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                        Fe   ++yp+++e+  LA+++gLt++qV++WF N R +
  Aqcoe5G183600.4.p 336 FEHflHPYPNESEKLTLASQTGLTKNQVSNWFINARVR 373
                        554458******************************88 PP
2BELL94.11.3e-30200268472
               BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                        ++q +++kL+sll++++ +Y+qy++ ++ ++ssFe++aglgsak+Yt+l l+a+SrhF +L++ai+ +i
  Aqcoe5G183600.4.p 200 DVQTRITKLISLLDKLESKYEQYYHHMEELVSSFEVIAGLGSAKSYTALTLQAMSRHFYSLREAIITHI 268
                        6799**************************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.7E-27136266IPR006563POX domain
PfamPF075268.4E-33139264IPR006563POX domain
PROSITE profilePS5007112.39314377IPR001356Homeobox domain
CDDcd000866.58E-11317378No hitNo description
SMARTSM003899.5E-10317381IPR001356Homeobox domain
SuperFamilySSF466899.41E-18319385IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-27321383IPR009057Homeodomain-like
PfamPF059202.6E-17334373IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MTNQNNFEQT DYAAYHSDRR NRTPLPQPPN VLPSIHTLEQ HFSRSMELLP APSLSEDSQT  60
SSRRHFLNLL GRANETDYQG QRLSLTLGSQ LPSHVLVQPH VNHIQHIRNE TSYISSPSVT  120
SSQNQSCSTS YETEIFATVV GNSRFLNAAQ SLLEEAVSVG GKSIDFNSDT SIAQLRRRRG  180
ALSISSQMQA ELYNEGLTPD VQTRITKLIS LLDKLESKYE QYYHHMEELV SSFEVIAGLG  240
SAKSYTALTL QAMSRHFYSL REAIITHIRL AAKRQYSQDS PRHQSGNTQL AVFDQGARHN  300
GVSLQQLGMV RNQRQTWRPT RGLPETSVGI LRSWLFEHFL HPYPNESEKL TLASQTGLTK  360
NQVSNWFINA RVRLWKPMIE EMYTEELGES SIDSNQSESI STTAKSASDH GDM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-17323381563Homeobox protein Meis2
3k2a_B6e-17323381563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275541.11e-164PREDICTED: BEL1-like homeodomain protein 11
RefseqXP_010275542.11e-164PREDICTED: BEL1-like homeodomain protein 11
SwissprotQ1PFD11e-90BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLA0A2G5EJF60.0A0A2G5EJF6_AQUCA; Uncharacterized protein
STRINGAquca_007_00310.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.15e-91BEL1-like homeodomain 11