PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe5G183600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | TALE | ||||||||
Protein Properties | Length: 414aa MW: 46639.9 Da PI: 7.1576 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31.5 | 3.1e-10 | 336 | 373 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+++e+ LA+++gLt++qV++WF N R + Aqcoe5G183600.1.p 336 FEHflHPYPNESEKLTLASQTGLTKNQVSNWFINARVR 373 554458******************************88 PP | |||||||
2 | BELL | 94.1 | 1.3e-30 | 200 | 268 | 4 | 72 |
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++q +++kL+sll++++ +Y+qy++ ++ ++ssFe++aglgsak+Yt+l l+a+SrhF +L++ai+ +i Aqcoe5G183600.1.p 200 DVQTRITKLISLLDKLESKYEQYYHHMEELVSSFEVIAGLGSAKSYTALTLQAMSRHFYSLREAIITHI 268 6799**************************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 4.7E-27 | 136 | 266 | IPR006563 | POX domain |
Pfam | PF07526 | 8.4E-33 | 139 | 264 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.39 | 314 | 377 | IPR001356 | Homeobox domain |
CDD | cd00086 | 6.58E-11 | 317 | 378 | No hit | No description |
SMART | SM00389 | 9.5E-10 | 317 | 381 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 9.41E-18 | 319 | 385 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.0E-27 | 321 | 383 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 2.6E-17 | 334 | 373 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence Send to blast |
MTNQNNFEQT DYAAYHSDRR NRTPLPQPPN VLPSIHTLEQ HFSRSMELLP APSLSEDSQT 60 SSRRHFLNLL GRANETDYQG QRLSLTLGSQ LPSHVLVQPH VNHIQHIRNE TSYISSPSVT 120 SSQNQSCSTS YETEIFATVV GNSRFLNAAQ SLLEEAVSVG GKSIDFNSDT SIAQLRRRRG 180 ALSISSQMQA ELYNEGLTPD VQTRITKLIS LLDKLESKYE QYYHHMEELV SSFEVIAGLG 240 SAKSYTALTL QAMSRHFYSL REAIITHIRL AAKRQYSQDS PRHQSGNTQL AVFDQGARHN 300 GVSLQQLGMV RNQRQTWRPT RGLPETSVGI LRSWLFEHFL HPYPNESEKL TLASQTGLTK 360 NQVSNWFINA RVRLWKPMIE EMYTEELGES SIDSNQSESI STTAKSASDH GDM* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 6e-17 | 323 | 381 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 6e-17 | 323 | 381 | 5 | 63 | Homeobox protein Meis2 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010275541.1 | 1e-164 | PREDICTED: BEL1-like homeodomain protein 11 | ||||
Refseq | XP_010275542.1 | 1e-164 | PREDICTED: BEL1-like homeodomain protein 11 | ||||
Swissprot | Q1PFD1 | 1e-90 | BLH11_ARATH; BEL1-like homeodomain protein 11 | ||||
TrEMBL | A0A2G5EJF6 | 0.0 | A0A2G5EJF6_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_007_00310.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75430.1 | 5e-91 | BEL1-like homeodomain 11 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe5G183600.1.p |