PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G172800.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 347aa MW: 37634.5 Da PI: 8.7282

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G172800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.8e-39	62	120	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ Aqcoe5G172800.1.p 62 QQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTT 120 7899****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-26	61	118	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.2E-32	63	119	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.506	65	119	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	67	103	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence Send to blast
MIQELFSGSS ASLLGGERKF PFSGVVLEGS PSSSSPSLST SSTNTTNTTS TTANNNTPTT 60 DQQNLRCPRC DSSNTKFCYY NNYNLTQPRH FCKTCRRYWT KGGALRNVPI GGGCRKNKTT 120 IAPATTAVKS NTAKIKTGST EFGKTTFGFD LELPSNPIVW TSPQNNQLMT LLRAAQMQNP 180 NPNPNPVTIK EEGSMIGSYN MCADTNSNSA IGTSALNATP IGVDPLSQIP VGLCNSFWKN 240 NQHQQYQQPQ HQQLQQQQQQ QHNFLMSDVQ AATGIQELFQ RLRSSGNYYS DHSSSQLNNN 300 NVANTSSSNP STITMDPSPI TGAEVGFWNN PSFVWSNLSA SNGAFP*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence Send to blast

MIQELFSGSS ASLLGGERKF PFSGVVLEGS PSSSSPSLST SSTNTTNTTS TTANNNTPTT  60
DQQNLRCPRC DSSNTKFCYY NNYNLTQPRH FCKTCRRYWT KGGALRNVPI GGGCRKNKTT  120
IAPATTAVKS NTAKIKTGST EFGKTTFGFD LELPSNPIVW TSPQNNQLMT LLRAAQMQNP  180
NPNPNPVTIK EEGSMIGSYN MCADTNSNSA IGTSALNATP IGVDPLSQIP VGLCNSFWKN  240
NQHQQYQQPQ HQQLQQQQQQ QHNFLMSDVQ AATGIQELFQ RLRSSGNYYS DHSSSQLNNN  300
NVANTSSSNP STITMDPSPI TGAEVGFWNN PSFVWSNLSA SNGAFP*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021629816.1	1e-101	dof zinc finger protein DOF1.1-like
TrEMBL	A0A2G5EK31	0.0	A0A2G5EK31_AQUCA; Uncharacterized protein
STRING	Aquca_007_00458.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	1e-35	Dof family protein

Link Out ? help Back to Top
Phytozome	Aqcoe5G172800.1.p