PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe5G172800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Dof | ||||||||
Protein Properties | Length: 347aa MW: 37634.5 Da PI: 8.7282 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.8 | 2.8e-39 | 62 | 120 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ Aqcoe5G172800.1.p 62 QQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTT 120 7899****************************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-26 | 61 | 118 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.2E-32 | 63 | 119 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.506 | 65 | 119 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 67 | 103 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence Send to blast |
MIQELFSGSS ASLLGGERKF PFSGVVLEGS PSSSSPSLST SSTNTTNTTS TTANNNTPTT 60 DQQNLRCPRC DSSNTKFCYY NNYNLTQPRH FCKTCRRYWT KGGALRNVPI GGGCRKNKTT 120 IAPATTAVKS NTAKIKTGST EFGKTTFGFD LELPSNPIVW TSPQNNQLMT LLRAAQMQNP 180 NPNPNPVTIK EEGSMIGSYN MCADTNSNSA IGTSALNATP IGVDPLSQIP VGLCNSFWKN 240 NQHQQYQQPQ HQQLQQQQQQ QHNFLMSDVQ AATGIQELFQ RLRSSGNYYS DHSSSQLNNN 300 NVANTSSSNP STITMDPSPI TGAEVGFWNN PSFVWSNLSA SNGAFP* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021629816.1 | 1e-101 | dof zinc finger protein DOF1.1-like | ||||
TrEMBL | A0A2G5EK31 | 0.0 | A0A2G5EK31_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_007_00458.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65590.1 | 1e-35 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe5G172800.1.p |