PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G160500.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 261aa    MW: 28416.8 Da    PI: 9.618
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G160500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32e-1155101354
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        ++h+e+E+rRRdriN  + +Lr+llP+       K +Ka+ L ++v+ +++L
  Aqcoe5G160500.3.p  55 KSHSEAEKRRRDRINGHLRTLRTLLPNT-----IKTDKASLLAEVVHQVREL 101
                        79*************************8.....6999**9999999877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.2552101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.4E-955101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-1255103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.39E-955104No hitNo description
SuperFamilySSF474595.76E-1256112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-1058107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2604.9E-5164229No hitNo description
PROSITE profilePS516719.109166245IPR002912ACT domain
CDDcd048730.00146167203No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MIPFQSYYGL GSCSSKDGYS SHNISSMDMI NGKSSSTIIS NSSSTAEKKA ISASKSHSEA  60
EKRRRDRING HLRTLRTLLP NTIKTDKASL LAEVVHQVRE LKKLADDVAS KNGNGSSSSS  120
SGTTTTSSTT SSGSGSREWV LPGESDELIM SYCDSNEKSE SWARVKVSIS CEDRVDLLKD  180
LSEAVKSVRA RVVKAEMSTI GGRTKSELVI EKRKGEEEED DSELSVLRRA LKSVIDKPTV  240
SGTNQILFGN KRQRLSHRFC *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010254503.12e-87PREDICTED: transcription factor bHLH30-like
RefseqXP_010254504.12e-87PREDICTED: transcription factor bHLH30-like
RefseqXP_010254505.12e-87PREDICTED: transcription factor bHLH30-like
TrEMBLA0A2G5EKN20.0A0A2G5EKN2_AQUCA; Uncharacterized protein
STRINGAquca_007_00571.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.18e-27bHLH family protein