PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe5G139300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | bHLH | ||||||||
Protein Properties | Length: 145aa MW: 16607.9 Da PI: 9.6575 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.6 | 3.4e-11 | 50 | 90 | 10 | 54 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+++Ns++ Lr+ +P++ s+K + ++i++ A++YI++L Aqcoe5G139300.1.p 50 RARREELNSKYIALRQQIPNP----STKRDRSSIVKDAIRYIHEL 90 89******************9....9****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.405 | 40 | 90 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.11E-12 | 45 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.39E-8 | 50 | 90 | No hit | No description |
Pfam | PF00010 | 1.4E-8 | 50 | 90 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.2E-6 | 50 | 96 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.7E-9 | 50 | 103 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence Send to blast |
MYEPRIASVV YQDGEWKKLP DNSSSDMMKV LSGLVKLTKP SVDFHFPGQR ARREELNSKY 60 IALRQQIPNP STKRDRSSIV KDAIRYIHEL TTTVDELRIL VEKKRKRNDT REMEEGFYSD 120 SPHSNTTVAS DSGFVVSFPL FLLV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 96 | 105 | LRILVEKKRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010243136.1 | 1e-20 | PREDICTED: transcription factor EAT1-like | ||||
Refseq | XP_010243137.1 | 1e-20 | PREDICTED: transcription factor EAT1-like | ||||
Refseq | XP_010243138.1 | 1e-20 | PREDICTED: transcription factor EAT1-like | ||||
TrEMBL | A0A2G5ELK2 | 2e-94 | A0A2G5ELK2_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_007_00768.1 | 3e-95 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06170.2 | 6e-15 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe5G139300.1.p |