PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G082700.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family HB-other
Protein Properties Length: 1153aa    MW: 128437 Da    PI: 7.4395
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G082700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox20.96.3e-0774130157
                        TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
           Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                        +r+R  ++++ ++ ++++F+ + ++s++e +e+++ +g+t +qV+ +F  +R + +k
  Aqcoe5G082700.2.p  74 KRPRDLLNPKGVKYMQSVFAIKDTISKKETREISALCGVTATQVREFFASQRSRVRK 130
                        799999***********************************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.55671131IPR001356Homeobox domain
SuperFamilySSF466891.8E-673134IPR009057Homeodomain-like
SMARTSM003897.9E-473135IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.607.0E-674138IPR009057Homeodomain-like
CDDcd000863.58E-474130No hitNo description
PfamPF000462.0E-474130IPR001356Homeobox domain
Gene3DG3DSA:1.20.930.106.3E-6266358IPR017923Transcription factor IIS, N-terminal
SuperFamilySSF476762.51E-5267358IPR017923Transcription factor IIS, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009911Biological Processpositive regulation of flower development
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1153 aa     Download sequence    Send to blast
MKKNSKEKPF ITLTEINVGN SLDSFTKFLD SQKDLFHSQV DQLQNIVVTQ CRLTGANPLS  60
QEMAAGALSI NIGKRPRDLL NPKGVKYMQS VFAIKDTISK KETREISALC GVTATQVREF  120
FASQRSRVRK LVRLSREKAI KSDAERMLDG GCSTSSDSAM HVIDPTPLNV VDPNAIKSDA  180
GKTLEGLCST NESAMHVINP TPLNSMDPKA VGEAPSCSSK EETVPGADDF EKKFIENIFS  240
SMRKEETFSG QVKLMEWILQ VQNSSVLYWF VTKGGLMILA AWLNEAALEE QTTTLFVIFQ  300
VLCHLPLHKA LPVQMSAILQ AVNRLRFYRT SDISNRAKVL LSRWSKLFVR SQALKKPSSS  360
FSATQKGKNL RQSEALSDDW QATLDLPEDI LSLALDGSEY CRKSEPSPSL KLLEASNDDS  420
NKKHVRNVSS TQTKERRKVQ LMEQPGRNTN GRSPQVTRAM NSNQGRPMSA DDIQKAKLRA  480
AFMQSKYGKT ATASNESRQQ KAEDQKKAAT QNSQLPSPSK APVKQVTEES ERPVVLPSVT  540
SPKPPGPSVD FLPGPSVDSL PEPSVNSLPE PSVNSLPEPS MDSKLSINFP PEPSMISMPS  600
LTAEESPWEK LKRNQISWRL PTEIMNSEWK VRVGENSKEV EIQTRRIKRE KETIYQRNQD  660
IPSNPKEPWD LEMDYDDTLT PQIPTEQAPE EFSIEQAPEP EVLHAPLRQG NVETTSLTPV  720
TTETSISASD NAAEPDLELL AVLLKNPELV FALTSGQGGN ISSADTVKLL DLIKNTGGGL  780
TGVLNGLKGP TEEEPVSFPS PTPYSLPSPT PTSLPSPTPS EHNGWRSDVR NNSFQQPVPV  840
SNREAYVLSQ TAPSVPSPIR ISATGLVQYQ SQTTNFTPGY AQVQSQTTQE YQSLPANNQE  900
NIHWGLNRHS IPVSSHQDRQ LPQMNQNSNP TPSAYNLPQQ HTLAAAYSRL QPESTSFGQI  960
SLQSETVNYG QMQSLKPAPV SVMLNLPDGT PLTLPPLMPT QPPQQSSLLP EQSFLQPMHG  1020
SMQWNGTTTS RQNQVGNNRG GRQMSYDTSD SNPWSQSNQN NYNSYPGEPP MRLPVSDNFT  1080
WDRNEYQDEP HFETYSPDRL ERSRSPEYHS GRDYSEPRRD RGRNPRPDWS RRRDSGRHDN  1140
KQGNRWRRDR RF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DLU10.0A0A2G5DLU1_AQUCA; Uncharacterized protein
STRINGAquca_017_00223.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02560.20.0HB-other family protein