PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe5G043300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | bZIP | ||||||||
Protein Properties | Length: 459aa MW: 49851.5 Da PI: 5.3754 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.2 | 5.7e-16 | 240 | 294 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L eN++L k+ ++ ++ Aqcoe5G043300.1.p 240 DVKRVRRMLSNRESARRSRRRKQAHLSELETQVAQLRVENSSLLKRFTDINTKYT 294 689*****************************************99888777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-19 | 238 | 302 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.22 | 240 | 292 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.2E-14 | 241 | 293 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.9E-12 | 242 | 293 | No hit | No description |
SuperFamily | SSF57959 | 1.13E-11 | 242 | 291 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 245 | 260 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 2.9E-43 | 309 | 429 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence Send to blast |
MERVYSVEEI SNPFWQSPPP SLGLEDPKMN RSSSEWAFQR FLQQELPSPS PSPVVQPPPP 60 PSSSTIVTTS SSSSSNSQSS DLSKINSTKP IFIDKEVVEI KNPSLSVPVS VPSQPPPSDV 120 PSNVSVDSEE YQAILKRRLD LACAAVALTR ATSLKPQDSA PLVDNGPHQS GPQAPGKGPG 180 FSSEADKTLV APLGIPALFA TQKKSGGQIK PTTSASSREQ SDDEDLEGET EITDNMDPAD 240 VKRVRRMLSN RESARRSRRR KQAHLSELET QVAQLRVENS SLLKRFTDIN TKYTEAAVDN 300 RILKADVETL RAKVKMAEDA VKRMTGFNPV FQAMSEISNM GMPFDGSPSD TSADASVPVQ 360 ENPKQHFYQQ ASNNQLNDHG ANNCLADIPP IPQIEEVQNS TGSNKMGRTP SMLRVASLEH 420 LQKRIRGGTT SSGPVQWDAA WDPETPQAMD SGNRQSQV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 254 | 261 | RRSRRRKQ |
2 | 256 | 261 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_026423013.1 | 1e-156 | light-inducible protein CPRF2-like | ||||
Swissprot | Q99090 | 1e-122 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A2G5DNV3 | 0.0 | A0A2G5DNV3_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_017_00582.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 1e-59 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe5G043300.1.p |
Publications ? help Back to Top | |||
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