PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe4G188300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | GeBP | ||||||||
Protein Properties | Length: 213aa MW: 24748.5 Da PI: 9.8273 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 70.9 | 2.6e-22 | 22 | 122 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksg.kep.sfskehdqki 88 f++lws+ De+vlL+G+i+fk+kt++ +++ + +++ ++ks+s++++ +q+ K r+L++K+ v++++sg k+p + ++ h+++ Aqcoe4G188300.1.p 22 PFEKLWSDADELVLLKGMIEFKTKTNSafiDSTPKFETLHKSIEKSLSIEFTIKQVQGKFRKLRDKYFSVVERVRSGvKDPfHGKSLHEKHL 113 5899*********************99777777789999**********************************666514441446779**** PP DUF573 89 felskkiWg 97 ++ls+ +Wg Aqcoe4G188300.1.p 114 YQLSENFWG 122 ********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.2E-19 | 23 | 122 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence Send to blast |
MNQVEKNAAQ PKPITGSSSK NPFEKLWSDA DELVLLKGMI EFKTKTNSAF IDSTPKFETL 60 HKSIEKSLSI EFTIKQVQGK FRKLRDKYFS VVERVRSGVK DPFHGKSLHE KHLYQLSENF 120 WGDFKVKESK HPNVSLDVTE FFYLEQFWKG NNATLPPGLV RNKQWEECIG RDNAVSLNLK 180 AKELIIDEME IYLRRLELIK ETTHLKLDFL KK* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G5CJ90 | 1e-155 | A0A2G5CJ90_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_050_00014.1 | 1e-155 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 4e-12 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe4G188300.1.p |