PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G185000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 283aa    MW: 32730.3 Da    PI: 9.5263
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G185000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57368.41.6e-2192192297
             DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksg.kep.sfskehdqki 88 
                         f++lws+ De+vlL G+i+fk+kt++   +++   + + + ++ks+s++++ +q+  K r+LK+K+   v++++sg k+p + ++ h+++ 
  Aqcoe4G185000.1.p  92 PFEKLWSDADELVLLNGMIEFKTKTNSvfiDSTPKFETLLKSIEKSLSIEFTIKQVKGKFRKLKDKYFSVVERVRSGvKDPfHGKSLHEKHL 183
                        5899*********************9877777888999999********************************666514441446779**** PP

             DUF573  89 felskkiWg 97 
                        ++ls+ +Wg
  Aqcoe4G185000.1.p 184 YQLSENFWG 192
                        ********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-1893192IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MASPTTTSTS QSTSSYEDDE DAVQSSHEEE EQQISQKKKT VNISMKRPLK SVDDDNERRR  60
MVSYKKPKNI MNQVEKNAAQ PKPITGSSSK NPFEKLWSDA DELVLLNGMI EFKTKTNSVF  120
IDSTPKFETL LKSIEKSLSI EFTIKQVKGK FRKLKDKYFS VVERVRSGVK DPFHGKSLHE  180
KHLYQLSENF WGDVKVKESK HPNVSLDVTE FFYLEQFWKG NNATLPPGLV RNKQWEECIG  240
RDNAVSLNLK EKELIIDEME IYLRRLELIK ETTKLKLDFL KK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CC640.0A0A2G5CC64_AQUCA; Uncharacterized protein
STRINGAquca_065_00010.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-10DNA-binding storekeeper protein-related transcriptional regulator