PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G162300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family STAT
Protein Properties Length: 741aa    MW: 83471 Da    PI: 6.6102
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G162300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT1881.1e-582413601120
               STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipkl 92 
                        ldvvll+ lg+pv+ d+evvasLlyad+g++vek++daeapLL++ydG+ef+s  rp+kll GrasfklkisqLsskcdnrLfr++f+++k 
  Aqcoe4G162300.1.p 241 LDVVLLDGLGHPVDLDMEVVASLLYADNGAPVEKPSDAEAPLLTNYDGIEFASFLRPSKLLLGRASFKLKISQLSSKCDNRLFRVRFDVLKS 332
                        8******************************************************************************************* PP

               STAT  93 kkypfleavskpirCisrsrntrssslt 120
                        ++ypflea+++pirCisrsrntr+ss++
  Aqcoe4G162300.1.p 333 RRYPFLEAYTSPIRCISRSRNTRPSSVV 360
                        ************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498995.28E-842188IPR013320Concanavalin A-like lectin/glucanase domain
Gene3DG3DSA:2.60.120.2002.7E-5114187IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF555502.46E-8640720IPR000980SH2 domain
Gene3DG3DSA:3.30.505.107.1E-5643711IPR000980SH2 domain
PROSITE profilePS5000110.048644740IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 741 aa     Download sequence    Send to blast
MYKPSVSVGL LTAREMAAKV SYPHEDEYTS LTDLNIKIPE ENDATFFICF WLYILGSYTT  60
PPVTIIQQRH TDIEGNAPFL LLNKEKKLML FPFKFLLDES CQHGTSSSWS EVPASTEIEY  120
SFNKWVHVGC EVSLKSVRIY IDGVLEGEKS LLPFLKNGSS LKNLRGTTLG GASAENGTVQ  180
GYVHYVRFIL PLKSAIQDHI IKNPPIELSI DTSGITEIEE DEDGVWSVVG GKASCRRNFN  240
LDVVLLDGLG HPVDLDMEVV ASLLYADNGA PVEKPSDAEA PLLTNYDGIE FASFLRPSKL  300
LLGRASFKLK ISQLSSKCDN RLFRVRFDVL KSRRYPFLEA YTSPIRCISR SRNTRPSSVV  360
GKKSTSASNI HDKYQLLEID DGCPEAQQNN EDGHLAKSPI PELRCSTPPK RTKAGSEKQS  420
VRVQADSTFG RQYDGCKSNR LSSNQVGYVH GEGVKGRVDN LEGTDNTLSD SESVQARDPA  480
SKKVESTRNP VPDFIIFKYC LGGMNERSLL LKEVTTFATD EEMICFGQQV FLYTGCSHQW  540
YQISIAKRLL REGSDAWNLI SKGNSYVHWK NAVLEIGEQF KRISRCCTRH LVEQDFELLR  600
RLAGCQEYMS RENFDKMWCW LYPVAFTLSR EGINAMWGCM SPLWIEGLIT KEEAEASLES  660
ARISQQPGTF ILRFPTSRSW PHPDAGSLIV TYVGNDLLLH HRLLSLDYRD MKLKSLEELF  720
LEEPLLTRLG RVTREYTKLS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010274602.10.0PREDICTED: uncharacterized protein LOC104609879
RefseqXP_010274603.10.0PREDICTED: uncharacterized protein LOC104609879
RefseqXP_010274604.10.0PREDICTED: uncharacterized protein LOC104609879
TrEMBLA0A2G5CF860.0A0A2G5CF86_AQUCA; Uncharacterized protein
STRINGAquca_059_00010.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.10.0SH2 domain protein B