PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe4G151200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | GeBP | ||||||||
Protein Properties | Length: 283aa MW: 32805.4 Da PI: 9.6721 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 67.3 | 3.3e-21 | 92 | 192 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksg.kep.sfskehdqki 88 f++lws+ De+vlL G+i+fk+kt++ +++ + + + ++ks+s++++ +q+ K r+L++K+ v++++sg k+p + ++ h+++ Aqcoe4G151200.1.p 92 PFEKLWSDADELVLLNGMIEFKTKTNSvfiDSTPKFETLLKSIEKSLSIDFTIKQVQGKFRKLRDKYFSVVERVRSGfKDPfHGKSLHEKHL 183 5899*********************9877777888999999********************************777634441456789**** PP DUF573 89 felskkiWg 97 ++ls+k+Wg Aqcoe4G151200.1.p 184 YQLSEKFWG 192 ********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 5.7E-19 | 93 | 192 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
MASPTTTSTS QSTSSYEDDE DAVQSSHEEE QQQISQKKKT VNISMKRPLK SVDDDNERRR 60 MVSYKKPKNI MNQVEKNAAQ PKPITGSSSK NPFEKLWSDA DELVLLNGMI EFKTKTNSVF 120 IDSTPKFETL LKSIEKSLSI DFTIKQVQGK FRKLRDKYFS VVERVRSGFK DPFHGKSLHE 180 KHLYQLSEKF WGDFKIKESK QPNVSLDVPE FFYLEQFWKG NNATLPPGLV RNKQWEECIG 240 RDNAVSLNLK AKELIIDEME IYLRRLELIK ETTHIKLDFL KK* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G5E5B2 | 0.0 | A0A2G5E5B2_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_011_00014.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.1 | 9e-11 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe4G151200.1.p |