PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe4G144000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Dof | ||||||||
Protein Properties | Length: 282aa MW: 31599.3 Da PI: 9.3915 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 114 | 6.5e-36 | 49 | 103 | 5 | 59 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 lkcprC+stntkfCyynny+ sqPr+fCk+Crr+WtkGG+lrnvPvGggr++++ Aqcoe4G144000.1.p 49 PLKCPRCESTNTKFCYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGRKNKR 103 689**********************************************976665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 1.6E-31 | 50 | 102 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 27.698 | 50 | 104 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 9.0E-23 | 50 | 103 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 52 | 88 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence Send to blast |
MGLSSKQVSG EGFDWAKNIM QAGALELPNI VTPVRQQQQQ QQQQQSVPPL KCPRCESTNT 60 KFCYYNNYNR SQPRHFCKSC RRHWTKGGTL RNVPVGGGRK NKRLKTSHSS STNTTNKDIN 120 TSQGSKITKG SIQSQEQVHQ QQLPLEYNDQ KKFSEILYQS LLQPTSSLLP TSHHLDYINN 180 NLLVSTLPMD SLLPLPNHPS TTLSSFSTNP SSMLSSFDAR FQFPNVLNYT DEGKPSDNLT 240 TITTTTATTM TPPVQWQVPA ATNGVMDSPN FWNWEDLNTF N* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002268276.2 | 6e-69 | PREDICTED: dof zinc finger protein DOF1.1 | ||||
TrEMBL | A0A2G5C9B6 | 0.0 | A0A2G5C9B6_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_078_00053.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 5e-29 | TARGET OF MONOPTEROS 6 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe4G144000.1.p |