PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe4G142300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | GeBP | ||||||||
Protein Properties | Length: 357aa MW: 39827.2 Da PI: 4.7869 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 78.1 | 1.5e-24 | 136 | 233 | 1 | 97 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgk.epsfskehdqkifel 91 klfqr++se+Dei +L Gl++fk+k +k + +++fy+f+k+s+++ ++ sq+++K+ rL +K++k+ k+ak g +p++s++h+ k++ l Aqcoe4G142300.1.p 136 KLFQRIFSEKDEIDVLNGLLEFKNKGNKITNSALSEFYNFLKGSVNIGANLSQIINKVHRLHNKYRKNAKRAKPGAgHPTISNPHELKSYLL 227 579*******************9999999999***************************************88775389************* PP DUF573 92 skkiWg 97 sk iW+ Aqcoe4G142300.1.p 228 SKEIWD 233 *****8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.7E-23 | 138 | 233 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence Send to blast |
MAPKRPSPSD QPPSSVSISE DEIEGTEGED SEEESESESE EEKTPKPIQS SNPNNKPVEE 60 EEEEEDSDSD SDSDSDNEPV QHMVATKPTS TSTSTSTSSA AMKRPLETGD NNDKDSKKKK 120 KKIADIEEKK SGEEKKLFQR IFSEKDEIDV LNGLLEFKNK GNKITNSALS EFYNFLKGSV 180 NIGANLSQII NKVHRLHNKY RKNAKRAKPG AGHPTISNPH ELKSYLLSKE IWDDQIFKDA 240 EENKSGGVTA LNKSKSKLKS NGLLAVSPKV VDLMEEDNII GSQYQYLDQS LKPQNRLSLP 300 MPPADFGEIT AKDGWDKLGS SKAQRWKALI IKEAEVYLER VELVQEQTKW MLDMII* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 129 | KKKKKIADIEEKK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G5C4D9 | 1e-175 | A0A2G5C4D9_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_097_00003.1 | 1e-176 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 8e-14 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe4G142300.1.p |