PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe4G093600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Dof | ||||||||
Protein Properties | Length: 314aa MW: 35072.9 Da PI: 8.7978 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 53 | 7e-17 | 26 | 82 | 5 | 61 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++cprC+s +t f yy y +qPr Ck C yWt+ r + +G+ r+ n++s Aqcoe4G093600.1.p 26 RRRCPRCNSLETMFGYYSIYRDNQPRNHCKICSHYWTQEEMPRGISIGSKRKTNQHS 82 578*********************************************999988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50884 | 16.926 | 27 | 81 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 8.9E-14 | 27 | 81 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 2.0E-6 | 33 | 80 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence Send to blast |
MEKQGMGAME DQQQRQQLVE VQPCPRRRCP RCNSLETMFG YYSIYRDNQP RNHCKICSHY 60 WTQEEMPRGI SIGSKRKTNQ HSDAASSSTN RVCKIPRSVE NVFQTSGSDV RINRRDPVSR 120 ILAAEGNAPS NPSPFMRINE PRTLHASLRA PVTQSATIAT GSGLWAAILG GQSANQLLSG 180 LSGGVNQHLY PHSLHEQPQQ QQEQQHLYNS QNSWEGNTLV MRSTNVWQFQ PRLYNIGSVS 240 NPEALLWSNN NNIGQLRSQG TPFPHSTGVP DFQDFYNNVG RASDPEANLF NNNSNGIGGL 300 PVNPLFWPDN PKF* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G5D078 | 0.0 | A0A2G5D078_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_033_00060.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62430.1 | 3e-09 | cycling DOF factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe4G093600.1.p |