PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G093500.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 262aa MW: 29245.4 Da PI: 8.3512

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G093500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	111	5.5e-35	28	84	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 a++cprCds++tkfCy+nny+ +qPryfCk+C+ryWt+GG+lr+vP+Gg++r++++s Aqcoe4G093500.1.p 28 ARPCPRCDSSDTKFCYFNNYNSAQPRYFCKTCKRYWTQGGTLRDVPIGGSTRRDRRS 84 679**************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	3.7E-31	29	83	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.792	29	83	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	31	67	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-18	34	83	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence Send to blast
MEVMDAFQQQ QQQLQVRNNK NNNPRPPARP CPRCDSSDTK FCYFNNYNSA QPRYFCKTCK 60 RYWTQGGTLR DVPIGGSTRR DRRSYKRTCT GVDPLMKLLE EAAAASYGSG SSLMNQKPNT 120 NPLPRVEPSI NIYGSTGSPA INSFNQIHNV AGSNFVFPGG LGLPSYGQQQ QQQQQQQQQI 180 PPSHGFHMGE IDISNNQIWP IEQQIGIPST MPSTTHDEFQ QNFKNGSEVG GPTVSWTSFD 240 NSIQFPGNPL DPYYWSGFSG F*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	5e-24	OBF binding protein 1

Link Out ? help Back to Top
Phytozome	Aqcoe4G093500.1.p