PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G093300.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 327aa MW: 35875.8 Da PI: 9.2585

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G093300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123	9.8e-39	21	80	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg rknkk++ Aqcoe4G093300.1.p 21 QVPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGYRKNKKVK 80 56789****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-27	17	78	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.2E-33	23	78	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.096	24	78	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	26	62	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MSTGLMASSG RVMEKPVHQE QVPLKCPRCD SSNTKFCYYN NYSLSQPRHF CKACKRYWTR 60 GGTLRNVPVG GGYRKNKKVK KSGGTAGSDG SPSISSYTHT PLPHQMDMST TSHINQLLYG 120 LPNNPSFTNF PFQRFNSRNS SNGETLPTYN NHQSQLSALG LNFPSSSTTM NREEHDYGGA 180 GFNHTNQIQD LLTSSNSILS NLSLLGSASS SYATNASLIA SSLQKQKQVW NNGFKETRPN 240 SNFQALLPFE NLQMGGGNGD ASIVMDMVKM EEGKDRNANR MEWRVPNENH MEPIGSSDSP 300 LYWNSASSVG GWPDLTNYGS SVTPLI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003633022.2	1e-103	PREDICTED: dof zinc finger protein DOF1.4
TrEMBL	A0A2G5CZA0	0.0	A0A2G5CZA0_AQUCA; Uncharacterized protein
STRING	Aquca_033_00056.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	1e-41	Dof family protein

Link Out ? help Back to Top
Phytozome	Aqcoe4G093300.1.p