PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G088300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ARR-B
Protein Properties Length: 386aa    MW: 44358.1 Da    PI: 9.9563
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G088300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like62.76.9e-20229283156
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                        k+r++Wt +LHe+F++a+++L    + +P++i  lmkv  L +++++SHLQkYR++
  Aqcoe4G088300.1.p 229 KTRVVWTAQLHEKFLQALSKL-SMARVVPRRIHALMKVRELNISNIASHLQKYRMH 283
                        68*******************.99******************************96 PP
2Response_reg69.51.4e-23201241105
                        EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
       Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                        vl+vdD+pl + + +++l+ ++y +v++a+ geeal  lk+ +  +Dl+l D+ mpgmdG++ll   ++   ++p +++++  + + +++ l
  Aqcoe4G088300.1.p  20 VLVVDDDPLSLLIAERMLTTKHY-NVTTATRGEEALSFLKNCNdgFDLVLSDLHMPGMDGFQLLAIVTALY-DIPFLFMSSDHKLDVMERGL 109
                        89*********************.***************988888*******************9999888.******************** PP

                        HTTESEEEESS--HH CS
       Response_reg  91 kaGakdflsKpfdpe 105
                        +aGa+ f++Kp  ++
  Aqcoe4G088300.1.p 110 EAGARFFFTKPLTMS 124
                        ***********8765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521724.98E-3117124IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.3E-3117139No hitNo description
SMARTSM004482.2E-2418130IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011037.11619134IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.5E-2120125IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.24E-2821123No hitNo description
SuperFamilySSF466893.58E-15227286IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.2E-20228286IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-20229283IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MASITVGNPQ IRNMRVGLRV LVVDDDPLSL LIAERMLTTK HYNVTTATRG EEALSFLKNC  60
NDGFDLVLSD LHMPGMDGFQ LLAIVTALYD IPFLFMSSDH KLDVMERGLE AGARFFFTKP  120
LTMSNYENMW QFVYTENMEY FEGMNIEGGQ RPPPPPPPPS PQDRSSSLSI SDDINRQGRN  180
SSSSSNTSNG KKRRQDNGQD NKKQKRHYKN RGNEDQDFGK KTAVVPLKKT RVVWTAQLHE  240
KFLQALSKLS MARVVPRRIH ALMKVRELNI SNIASHLQKY RMHLNKYKGT PESDYPRSRI  300
RMRLPDETKY HSQSRDHSMR YNSYNYQNRP QSPLMADRPK LPNNFCPLTN INHVHSARPQ  360
YHFQEGSNDN SIAQDNYGHP TDVTNP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DAW40.0A0A2G5DAW4_AQUCA; Uncharacterized protein
STRINGAquca_024_00004.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-39response regulator 2