PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G427100.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 486aa MW: 54448.1 Da PI: 6.7652

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G427100.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.8	5e-05	401	435	16	55
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +++ L++++ + +K + a++L++A+ YIk Lq Aqcoe3G427100.2.p 401 LTDRITALQQIVSPF-----GKTDTASVLQEAIGYIKFLQ 435 678999999999998.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.201	385	434	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.88E-6	400	439	No hit	No description
SuperFamily	SSF47459	2.62E-9	400	442	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.8E-8	400	439	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence Send to blast
MAEDQGSEGS VANSSSTSNI WDLHGTSLSS WNNNNIPWHP SNPNSNSSCD EDISISNSFT 60 NTSNHSGLST DDSSRQLREH RASRQLAESS PDNHLWSKVL LTVGNGGSLH TNQDVGENFL 120 EALSSKNLAT NMFEPVCDYL KKMDNSWEYG NSTSYNNMER QLNSFSGSIL EHDNRVNNLS 180 NLVTDWSIAP PCPEVDRQVT QTTLCNMSLD SMDEYSESDL SQMKRNLSNS SMYGAADNSC 240 FMPYYGHDIK VESQHQPIEA SGNLLHRSYK NNNTSSSRCP DGHNSSITGD NEKYYYGMLD 300 TQWFNTRNLS DVISFNGCLN KPVLDLQTIK PCMKASSQTD TKLHNEISST APARGSTRGT 360 GVATEGKKKR SEESSETQFK KPKHETSTVS SVKVQVPKVK LTDRITALQQ IVSPFGKTDT 420 ASVLQEAIGY IKFLQEQVQV IITLLILTKS LLLVREKKNR AHYRFHHQFH NHNHHHHHII 480 ICFWY*

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence Send to blast

MAEDQGSEGS VANSSSTSNI WDLHGTSLSS WNNNNIPWHP SNPNSNSSCD EDISISNSFT  60
NTSNHSGLST DDSSRQLREH RASRQLAESS PDNHLWSKVL LTVGNGGSLH TNQDVGENFL  120
EALSSKNLAT NMFEPVCDYL KKMDNSWEYG NSTSYNNMER QLNSFSGSIL EHDNRVNNLS  180
NLVTDWSIAP PCPEVDRQVT QTTLCNMSLD SMDEYSESDL SQMKRNLSNS SMYGAADNSC  240
FMPYYGHDIK VESQHQPIEA SGNLLHRSYK NNNTSSSRCP DGHNSSITGD NEKYYYGMLD  300
TQWFNTRNLS DVISFNGCLN KPVLDLQTIK PCMKASSQTD TKLHNEISST APARGSTRGT  360
GVATEGKKKR SEESSETQFK KPKHETSTVS SVKVQVPKVK LTDRITALQQ IVSPFGKTDT  420
ASVLQEAIGY IKFLQEQVQV IITLLILTKS LLLVREKKNR AHYRFHHQFH NHNHHHHHII  480
ICFWY*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010270771.1	1e-167	PREDICTED: transcription factor bHLH111
TrEMBL	A0A2G5F7X5	0.0	A0A2G5F7X5_AQUCA; Uncharacterized protein
STRING	Aquca_002_01384.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	3e-16	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe3G427100.2.p