PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G426500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 362aa    MW: 40717.4 Da    PI: 9.6537
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G426500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.51.1e-1556151274
           trihelix   2 WtkqevlaLiearremeerlrrgk.......................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                        Wt +e+l+Li+a++ ++er  +++                        ++ +W++v ++++  g+ rs++qC++kw+nl ++ykk++e e +
  Aqcoe3G426500.1.p  56 WTLHETLVLITAKKLDDERRTKASttppdptnpnnnknnqqqlsstrTAELRWKWVENYCWNNGCLRSQNQCNDKWDNLLRDYKKVREYEAR 147
                        **************5444444443344455555555555555555559*****************************************999 PP

           trihelix  71 rtse 74 
                         t+ 
  Aqcoe3G426500.1.p 148 STNA 151
                        7654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.00548135IPR017877Myb-like domain
PfamPF138373.8E-955164No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MSEPPNTPTS SIILHHQQYL RQQQQQPFIS PTITLIPSPS PSPSTSIIRE YRKGNWTLHE  60
TLVLITAKKL DDERRTKAST TPPDPTNPNN NKNNQQQLSS TRTAELRWKW VENYCWNNGC  120
LRSQNQCNDK WDNLLRDYKK VREYEARSTN AAGPNDQLQS YWKLEKHERK ERNLPTNLVS  180
DVFEALNEVV HRRYSSTNTP KSTPSSSSNA GNDTPIKVLS PATAPPLLPP PPPSQQQQPP  240
PPQLPPPPPP PQTVSAETAT DSSETDQSER VDSETKRRRK AKSVGSSILK SASVLAQTLM  300
NCEEKKEKRH KDIIELEQRR LRIEEDRNEV NRQGIAGLIS AVNNLSGAIQ ALVSDRHNSA  360
T*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010270770.11e-116PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 2
RefseqXP_019054915.11e-116PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 2
RefseqXP_019054916.11e-116PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 2
TrEMBLA0A2G5F7P30.0A0A2G5F7P3_AQUCA; Uncharacterized protein
STRINGAquca_002_01378.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31310.13e-47Trihelix family protein