PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G382100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 545aa MW: 58612.1 Da PI: 6.5734

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G382100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.4	6e-09	356	404	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq Aqcoe3G382100.1.p 356 NSHSLAERVRREKISERMKFLQELVPGC----SKVTGKAVMLDEIINYVQSLQ 404 58***********************9....556***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	8.77E-17	351	422	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.49E-11	351	408	No hit	No description
PROSITE profile	PS50888	15.459	353	403	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.3E-16	354	420	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.3E-6	356	404	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	9.9E-10	359	409	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence Send to blast
MDLGDKDKFG IQKRGVDSLN YHSPNVSSDW RFGDSNQPLG LVTAENSAPI SKGDLMGTSM 60 VDSFWDHPNS QNLGFIDNNV HQVGTSTSNT VIRKGVPVTL RTGIENSMDM GWNSPNLMLR 120 GGAFLQSNAR NLPPSLSEFP ADSAFIERAA RFSCFNGGNF GDIVNPFNIS ESLNPYSKGR 180 GPVQGPQEVL SANGMSSLLA AESQKSELNM AEMSKDHSMS VEHGATGGSP VKNDIEKRGQ 240 IGMSSNESGE GEFSGGGQGE HSIPENDGGE PSSSKGISTK KRKRAAQNAE IDQDKGASQH 300 SGEAKADDKS KEKGGQNINS ATNKSAGKHG KDVSQASDAP KEDYIHIRAR RGQATNSHSL 360 AERVRREKIS ERMKFLQELV PGCSKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATVNPR 420 LDFNIEGILG KDVLQSRSGP STLGFSPDMS MVHPQMHPSQ QALLQTGIPG VGNSSDALRR 480 TINSQLAALN SGYKDLMPQN HQQIATGWDD ELHNVVQMGF GTNGPFNNQD LNGPLPPGHM 540 KVEL*

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence Send to blast

MDLGDKDKFG IQKRGVDSLN YHSPNVSSDW RFGDSNQPLG LVTAENSAPI SKGDLMGTSM  60
VDSFWDHPNS QNLGFIDNNV HQVGTSTSNT VIRKGVPVTL RTGIENSMDM GWNSPNLMLR  120
GGAFLQSNAR NLPPSLSEFP ADSAFIERAA RFSCFNGGNF GDIVNPFNIS ESLNPYSKGR  180
GPVQGPQEVL SANGMSSLLA AESQKSELNM AEMSKDHSMS VEHGATGGSP VKNDIEKRGQ  240
IGMSSNESGE GEFSGGGQGE HSIPENDGGE PSSSKGISTK KRKRAAQNAE IDQDKGASQH  300
SGEAKADDKS KEKGGQNINS ATNKSAGKHG KDVSQASDAP KEDYIHIRAR RGQATNSHSL  360
AERVRREKIS ERMKFLQELV PGCSKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATVNPR  420
LDFNIEGILG KDVLQSRSGP STLGFSPDMS MVHPQMHPSQ QALLQTGIPG VGNSSDALRR  480
TINSQLAALN SGYKDLMPQN HQQIATGWDD ELHNVVQMGF GTNGPFNNQD LNGPLPPGHM  540
KVEL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010261471.1	0.0	PREDICTED: transcription factor bHLH49
Refseq	XP_010261481.1	0.0	PREDICTED: transcription factor bHLH49
TrEMBL	A0A2G5F5X9	0.0	A0A2G5F5X9_AQUCA; Uncharacterized protein
STRING	Aquca_002_00983.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-111	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe3G382100.1.p