PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G351100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 386aa    MW: 43314.8 Da    PI: 4.4285
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G351100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-194493255
                AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Aqcoe3G351100.1.p 44 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACMLRG 93
                       789******.7*********33....35***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.01E-3143100No hitNo description
SuperFamilySSF541712.48E-1944101IPR016177DNA-binding domain
PfamPF008471.9E-144493IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-2744100IPR001471AP2/ERF domain
PROSITE profilePS5103219.70444101IPR001471AP2/ERF domain
SMARTSM003801.7E-3544107IPR001471AP2/ERF domain
PRINTSPR003675.4E-84556IPR001471AP2/ERF domain
PRINTSPR003675.4E-86783IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MARKRKVVES GEENDAVDRN MGWEEMVKEA NAVTALGVRR ARKRFVGVRQ RPSGRWVAEI  60
KDTIQKIRVW LGTFDTAEEA ARAYDEAACM LRGSNTRTNF WPCSPSATSS PALPSKISNL  120
LLLRLKARNQ QQQQQQQQQQ KQQHKEDLEE QKEDGVEEVQ DTQFSEFFNE PNDPRTMYNN  180
TNSTSSTSTI TTTTSDYMTG SLESSFSRTE DCGVKELDVD YHWSDIAEPL PGGNDSYSGG  240
SGEEEGEEGE VNDSIDLGIM DFKFMDLTGS SCYYSPFEMA EDIVEPIEQE NSADEPSMLR  300
EAMKRMKYER KFSASLYAFN GISECLQLKL GMEGSKARGR PDNLTNLSRN TCSINTGEEH  360
IGIDDVKVQE QVNLQTSAEV GICQR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1437100771Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021603585.11e-129ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A2G5F4Q90.0A0A2G5F4Q9_AQUCA; Uncharacterized protein
STRINGAquca_002_00706.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-22related to AP2 11