PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe3G339800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Nin-like | ||||||||
Protein Properties | Length: 339aa MW: 38764 Da PI: 4.7975 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 84.2 | 1.2e-26 | 168 | 217 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 e++ +++++yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl Aqcoe3G339800.1.p 168 TELTRKTIAQYFYMPITQAAKELNVGLTLLKKRCRELGIPRWPHRKLMSL 217 6899*******************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 18.03 | 153 | 237 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.1E-22 | 170 | 217 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MDQKHTSVQN ISFSTTTSHG FETVSNLFEE DPFFMSQKIH PLDFSGDSNF NYPWEFPMQD 60 DNVLDAIPLM ECLPTDPLLY ASLDASLDII PSENSTTNCQ GDLYKRWEEE FGAFDEMSVC 120 QFESDNKQIV LYDNGDQMSS NNSGDGVWND QKKVNRCSER KITNTSSTEL TRKTIAQYFY 180 MPITQAAKEL NVGLTLLKKR CRELGIPRWP HRKLMSLQTL IKNVQEMEDG DAGDTKIRDA 240 IELLEQQKKL MEEMPEVELE EKTKKLRQAC FKANYKKRKL MGMIEWPSSP NSHLSIESME 300 TSTAASNKRL GFWKCTFFIL VCCIGVCNSS LTSLFQTM* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010258431.1 | 1e-75 | PREDICTED: protein RKD1-like | ||||
TrEMBL | A0A1U8AA29 | 3e-74 | A0A1U8AA29_NELNU; protein RKD1-like | ||||
STRING | XP_010258431.1 | 6e-75 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 3e-39 | RWP-RK domain-containing protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe3G339800.1.p |