PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe3G223800.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | bHLH | ||||||||
Protein Properties | Length: 283aa MW: 31979.9 Da PI: 7.5441 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 47 | 4.4e-15 | 113 | 164 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+eY+k+L+ Aqcoe3G223800.2.p 113 QRMTHITVERNRRKQMNEYLAVLRSLMPES---YTQRGDQASIVGGAIEYVKELE 164 79****************************...9******************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.21E-14 | 111 | 168 | No hit | No description |
SuperFamily | SSF47459 | 4.97E-18 | 111 | 179 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.523 | 112 | 163 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.3E-15 | 113 | 177 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.1E-12 | 113 | 164 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.3E-11 | 118 | 169 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
MLLEAFVSDD LNKYFLNNMY DNVCSTTTQH YIHSSTSTSN LFKNNVGNSG GILFSNNESF 60 EDLTPLDSSS SMQLGGGSFM KTQDDASNST TPRSRKRSRR PRVCKNKEEA ETQRMTHITV 120 ERNRRKQMNE YLAVLRSLMP ESYTQRGDQA SIVGGAIEYV KELEQLLQSL EAQKRQQTQK 180 EGTDESSSNF FPPPFSQFFS CPQFSWCQIP GDNPSENRTA IADIEVTLIE SHANLRILSR 240 KRPHQLFKMV AGFQNLQLTI LHLNVTTLDP LVFYSLSAKL VP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 124 | RMTHITVERNRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023923169.1 | 1e-94 | transcription factor bHLH71-like | ||||
Swissprot | Q9SK91 | 4e-63 | BH094_ARATH; Transcription factor bHLH94 | ||||
TrEMBL | A0A2G5ES56 | 0.0 | A0A2G5ES56_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_005_00478.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 1e-50 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe3G223800.2.p |
Publications ? help Back to Top | |||
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