PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe3G079200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | ZF-HD | ||||||||
Protein Properties | Length: 98aa MW: 10464.6 Da PI: 8.6934 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 105.4 | 3.6e-33 | 28 | 84 | 3 | 60 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 +vrY eC+kNhAa++Gg+avDGC+Efm+s geegt+ alkCaAC CHRnFHRreve+e Aqcoe3G079200.1.p 28 SVRYGECQKNHAAKIGGYAVDGCREFMAS-GEEGTSGALKCAACSCHRNFHRREVEYE 84 79**************************9.999*********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 2.0E-20 | 26 | 94 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 7.4E-31 | 29 | 81 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 1.2E-26 | 30 | 81 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 25.433 | 31 | 80 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence Send to blast |
MKKRVTSKGG EGLYRSSTNT TTSSSARSVR YGECQKNHAA KIGGYAVDGC REFMASGEEG 60 TSGALKCAAC SCHRNFHRRE VEYEVVCECS SPSTNGR* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Inhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. {ECO:0000269|PubMed:21455630}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017975895.1 | 2e-42 | PREDICTED: mini zinc finger protein 2 | ||||
Refseq | XP_021297644.1 | 3e-42 | mini zinc finger protein 2-like | ||||
Swissprot | Q9LJW5 | 2e-35 | MIF2_ARATH; Mini zinc finger protein 2 | ||||
TrEMBL | A0A2G5ENV6 | 2e-63 | A0A2G5ENV6_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_006_00297.1 | 3e-64 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 2e-29 | mini zinc finger 2 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe3G079200.1.p |
Publications ? help Back to Top | |||
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