PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G430800.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family FAR1
Protein Properties Length: 283aa    MW: 32073.6 Da    PI: 7.6984
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G430800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR189.25.7e-2873164291
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                        fYn YA+  GFs+rk   ++s r++++t+r fvCs+eg+r+e++    + + +r+ a+tr+gCka+l vkk+++g+w+v++++ eHnH+lap
  Aqcoe2G430800.2.p  73 FYNGYARYSGFSIRKGPLYRSARDRSVTSRIFVCSREGFRRETSALneRGNIKRRMAVTRVGCKAQLWVKKQDSGNWVVKQFQPEHNHNLAP 164
                        9****************************************9988744556678999********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.0E-2673164IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MSMDQSSFFS PFSVDSENAN SDGLSDVDVR TSAAEGTLVP ENSGEREVTS SSDLNLEPYV  60
GQEFKSEQEA RAFYNGYARY SGFSIRKGPL YRSARDRSVT SRIFVCSREG FRRETSALNE  120
RGNIKRRMAV TRVGCKAQLW VKKQDSGNWV VKQFQPEHNH NLAPTTVHRL RSHKNMIDNL  180
KEYVETLKGA GVDTSKIQSL FVEEARGMSN AGVSENDVES EDKKKIRELS TELHRERRRS  240
AAYQEQLRKL LKDMEDHAQH LSKQIEDIVG DMKDLEGNNR LS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026421054.11e-132protein FAR1-RELATED SEQUENCE 5-like isoform X2
RefseqXP_026432594.11e-132protein FAR1-RELATED SEQUENCE 5-like isoform X2
TrEMBLA0A2G5CEL70.0A0A2G5CEL7_AQUCA; Uncharacterized protein
STRINGAquca_058_00085.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-41FAR1 family protein