PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G415300.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 706aa    MW: 78585.1 Da    PI: 5.3975
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G415300.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14.2e-08609650144
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                        ++rW+++E el+++a++q+G++ ++ I + ++ gR + q ++++
  Aqcoe2G415300.3.p 609 KKRWSKQETELFYEAIRQFGTD-FAMIEKIFP-GRERRQWVLKY 650
                        68********************.*********.**987766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.12E-9598657IPR009057Homeodomain-like
PfamPF159635.2E-23602670No hitNo description
Gene3DG3DSA:1.10.10.608.2E-5605651IPR009057Homeodomain-like
SMARTSM007172.1E-6608656IPR001005SANT/Myb domain
CDDcd001672.12E-5611652No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    Send to blast
MAMDLDSFDE ILSEPTGRNA RAGAKFQPKG KPQPRKEKQS TVPTSLNDVA KDTVVTTATV  60
HQDNLQSVSL TQMPDVMSTT LTDSLPKLPQ NQELGNSTEV FHSGFPVPDG DRNSTPVDIS  120
FLHSELTTSD THGDLQSGFA GIETAEIYSG FDEVFCESTA AASTARKFQP RTKVNAQPNN  180
KFPLFRAGPE GSISHDEVPM FHASNVQDVE GGRGQSSLSS VDCSTLTQSS LSPPNPSSEY  240
VPQEKVHIRE SGSSDYGEGF LIDTERLGAE EQAFHELDSC NAGTWTTSNG NSQQFPSEIE  300
YIDGHLHPAS ELPASGDLTH HDAPGSSAFI PQEGVESQGV PIISGKESTR SRRTKSATEL  360
EDSGKKVHAR SVEELSQETL DERPLNAADK GIESGKSSRR LRKRSNAPVL ADEMEGGTEE  420
VDSQAEPSTV PLVDEDVYSD GGDKCREDTS HHKKTAIKAK PVGQKEKTGP KRKKSVEGPD  480
ALGKEPPKKK FSHSTRRNRR SVNKTLLETP EDEIDPQNLP IKDLILLGEL REKRMKKDGV  540
VSNDTLPNQT VNNFFPEDDF YNQDDPYAND PYANDPYPFE DEPFGSEQVP KAAPLKLNYH  600
SFMTRNTSKK RWSKQETELF YEAIRQFGTD FAMIEKIFPG RERRQWVLKY KNEERRHPMK  660
LHDALTNRLK EYLGMAVYHE SLIRFRVVMV QMWVQKKGWC LWPSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13138PQPRKEKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CX250.0A0A2G5CX25_AQUCA; Uncharacterized protein
STRINGAquca_034_00015.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.18e-36MYB_related family protein