PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G381900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family G2-like
Protein Properties Length: 489aa    MW: 53408.2 Da    PI: 5.5829
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G381900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.51.5e-33251305155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        k r+rWtpeLHe+Fv+av+qLGGse+AtPk +l+lm+v+gLt+ hvkSHLQkYR+
  Aqcoe2G381900.1.p 251 KSRMRWTPELHECFVQAVNQLGGSERATPKGVLKLMNVEGLTILHVKSHLQKYRT 305
                        68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575124No hitNo description
PROSITE profilePS5129411.875248308IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.1E-31249306IPR009057Homeodomain-like
SuperFamilySSF466898.42E-18250305IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-25251305IPR006447Myb domain, plants
PfamPF002492.7E-10253304IPR001005SANT/Myb domain
PfamPF143797.6E-24336382IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MEGRSSVTIQ RPSNQAGNVG VSGCMSSSLP VLPLPLEEKY TKFSYSQQIC FERELMSDPV  60
APFDTPLAST GENVGHKISS TSGFCTDLHS SSSSTHASHL RNSPFISQVS NNGVSSPIAF  120
SSHSGIIRST PSSSCNKRNN NASCGNILDQ KSQIENSNGA TASEEHTSQS DWQQWADQLI  180
TDDENLAADW DELLLDTNAV DSEPKTASQA PKQSSVISPH QERTHQQPSV QSRELAMVTS  240
PLSPVCGSSI KSRMRWTPEL HECFVQAVNQ LGGSERATPK GVLKLMNVEG LTILHVKSHL  300
QKYRTARYGP DLTDGTSEKK MSAAEETPSL SPKMSIEISE ALRLQMEVQK RLHEQLEIQR  360
NLQLRIEEQG KVLQMMFEKQ CKKVGDNFNL STSTSTSTLN EPSTQNLPLH DAKSEPEATE  420
SDHDTKHGPI NDTITVENSH NNGKEQKMLE IEVIEVCALD MGEGSDKSPK KRARTDDTTL  480
SSGKSASD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-29251308259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-29251308259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-29251308259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-29251308259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-29251308259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-29251308259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-29251308259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-29251308259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1468474PKKRART
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010264912.11e-156PREDICTED: protein PHOSPHATE STARVATION RESPONSE 1 isoform X2
TrEMBLA0A2G5CYC70.0A0A2G5CYC7_AQUCA; Uncharacterized protein
STRINGAquca_034_00282.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.12e-79phosphate starvation response 1